RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 ZC3H10Q96K80 434 aaKnown RBP11.55□□□□□ -0.56
CTSB-214ENST00000527243 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 PANX2Q96RD6 677 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 MAGEB5Q9BZ81 275 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 TPSD1Q9BZJ3 242 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 TRIM7Q9C029 511 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 PARVAQ9NVD7 372 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 KIAA1522Q9P206 1035 aaPredicted RBP11.55□□□□□ -0.56
CTSB-214ENST00000527243 RAD54BQ9Y620 910 aa11.55□□□□□ -0.56
CTSB-214ENST00000527243 EML5Q05BV3 1969 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 CKAP5Q14008 2032 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 FAM72CH0Y354 149 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 H0Y626 953 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 DCLK1O15075 740 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 ASLP04424 464 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 ATP5BP06576 529 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 POLR2EP19388 210 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 MZF1P28698 734 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 CTSOP43234 321 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 COPAP53621 1224 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 FAM72AQ5TYM5 149 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 LAIR1Q6GTX8 287 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 SDE2Q6IQ49 451 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 FAM72DQ6L9T8 149 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 KBTBD6Q86V97 674 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 FAM72BQ86X60 149 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 OR8K1Q8NGG5 319 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 KIF18AQ8NI77 898 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 HMGB4Q8WW32 186 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 RUBCNQ92622 972 aa11.54□□□□□ -0.56
CTSB-214ENST00000527243 C16orf45Q96MC5 204 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 MKRN2Q9H000 416 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 DUSP15Q9H1R2 295 aaPredicted RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 PPARGC1AQ9UBK2 798 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 CNOT8Q9UFF9 292 aaKnown RBP11.54□□□□□ -0.56
CTSB-214ENST00000527243 CEP250Q9BV73 2442 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 MFAP3LO75121 409 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 MYBL1P10243 752 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 HLA-EP13747 358 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 BCKDHBP21953 392 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 OXCT1P55809 520 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 ZNF177Q13360 481 aaPredicted RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 USP39Q53GS9 565 aaKnown RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 DCUN1D2Q6PH85 259 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 SERPINA13PQ6UXR4 307 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 CYP4V2Q6ZWL3 525 aaPredicted RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 MTERF4Q7Z6M4 381 aaKnown RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 SETD3Q86TU7 594 aaPredicted RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 NLRP14Q86W24 1093 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 FRMD1Q8N878 549 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 ZNF653Q96CK0 615 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 TRIM11Q96F44 468 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 PSMB7Q99436 277 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 FEM1AQ9BSK4 669 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 SLC6A17Q9H1V8 727 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 RETREG1Q9H6L5 497 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 PRSS16Q9NQE7 514 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 MPP6Q9NZW5 540 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 USP36Q9P275 1121 aaKnown RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 OR12D3Q9UGF7 316 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 MBD1Q9UIS9 605 aaPredicted RBP11.53□□□□□ -0.56
CTSB-214ENST00000527243 PLA2G4CQ9UP65 541 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 ERVW-1Q9UQF0 538 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
CTSB-214ENST00000527243 SPAG17Q6Q759 2223 aa11.52□□□□□ -0.56
CTSB-214ENST00000527243 CFAP54Q96N23 3096 aa11.52□□□□□ -0.56
CTSB-214ENST00000527243 ANKRD62A6NC57 917 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 LRIG2O94898 1065 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 EPN2O95208 641 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 IGLV3-19P01714 112 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 CYP1A2P05177 515 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 EPHX1P07099 455 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 RETP07949 1114 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 L1CAMP32004 1257 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 AIF1P55008 147 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 STARD3Q14849 445 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 LPAL2Q16609 132 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
CTSB-214ENST00000527243 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
CTSB-214ENST00000527243 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.57
CTSB-214ENST00000527243 PMS2CLQ68D20 193 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
CTSB-214ENST00000527243 LRRC31Q6UY01 552 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 PRR23BQ6ZRT6 265 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 CEP68Q76N32 757 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
CTSB-214ENST00000527243 VPS36Q86VN1 386 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms