RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 CEP162Q5TB80 1403 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 DIP2BQ9P265 1576 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 NUP153P49790 1475 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 PIK3R4Q99570 1358 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 RAPGEF6Q8TEU7 1601 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SYNJ2BP-COX16A0A087WUM0 186 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ANKRD18BA2A2Z9 1011 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 C2orf81A6NN90 581 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ERVV-2B6SEH9 535 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 UBE2Q2LH0YL09 131 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 CES2O00748 559 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ZSCAN9O15535 394 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 KCNQ3O43525 872 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 PLA2G6O60733 806 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TMCC2O75069 709 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 B3GALNT1O75752 331 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 KRT38O76015 456 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TJP3O95049 919 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TUBB4AP04350 444 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SLC3A2P08195 630 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 EEF2P13639 858 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 HGFP14210 728 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 CREB1P16220 341 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ENGP17813 658 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 GKP32189 559 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 CYP2C18P33260 490 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 GSTM5P46439 218 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 GTF2A1P52655 376 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 UBASH3AP57075 661 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 EIF4A1P60842 406 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 PRPF4BQ13523 1007 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 EIF4A2Q14240 407 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 CSHL1Q14406 222 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 KCNAB1Q14722 419 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 KRTAP27-1Q3LI81 207 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 CERKLQ49MI3 558 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 ARMC4Q5T2S8 1044 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 MANEALQ5VSG8 457 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 CLEC9AQ6UXN8 241 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SYNE3Q6ZMZ3 975 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 PTCHD4Q6ZW05 846 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ZDHHC17Q8IUH5 632 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 LRRC49Q8IUZ0 686 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SFTPA1Q8IWL2 248 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 RNF168Q8IYW5 571 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 CEP57L1Q8IYX8 460 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 NRSN1Q8IZ57 195 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 AFAP1Q8N556 730 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SMRP1Q8NCR6 262 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ADAMTS15Q8TE58 950 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 POF1BQ8WVV4 589 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ARHGEF2Q92974 986 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 TBC1D20Q96BZ9 403 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 DAZAP1Q96EP5 407 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 CFAP36Q96G28 342 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 SPATA17Q96L03 361 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 FAM81BQ96LP2 452 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 NAP1L3Q99457 506 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 NUDT22Q9BRQ3 303 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TCHPQ9BT92 498 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 FAM167BQ9BTA0 163 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TTLL2Q9BWV7 592 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 WDR12Q9GZL7 423 aaKnown RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 UNC45AQ9H3U1 944 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 TMEM8AQ9HCN3 771 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 RASSF1Q9NS23 344 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.42□□□□□ -1.86
COPB1-205ENST00000526527 FBXL5Q9UKA1 691 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ZMYND8Q9ULU4 1186 aaPredicted RBP3.42□□□□□ -1.86
COPB1-205ENST00000526527 GABRQQ9UN88 632 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ADAMTS5Q9UNA0 930 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 AGTPBP1Q9UPW5 1226 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 KAT6BQ8WYB5 2073 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 ITIH6Q6UXX5 1313 aa3.42□□□□□ -1.86
COPB1-205ENST00000526527 MAPKBP1O60336 1514 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 KDM5BQ9UGL1 1544 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 A0A087WV62 115 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 HNRNPCL2B2RXH8 293 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 H0YIZ8 118 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 CASQ2O14958 399 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 HNRNPCL1O60812 293 aaKnown RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 NBNO60934 754 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PMPCBO75439 489 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 RNF8O76064 485 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 BAIAP3O94812 1187 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 WDR47O94967 919 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 NDST3O95803 873 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ITGA2BP08514 1039 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PDHA1P08559 390 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 SRGAP2BP0DMP2 458 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 STMN1P16949 149 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MATN1P21941 496 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MMP8P22894 467 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ADRA1DP25100 572 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 NR4A2P43354 598 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MAPK9P45984 424 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PAPOLAP51003 745 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms