RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 STX10O60499 249 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 RTN2O75298 545 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 RFPL3O75679 317 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 LDOC1O95751 146 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 MOCS2O96007 188 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 ASLP04424 464 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 GIMD1P0DJR0 217 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 GOT1P17174 413 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 TACR2P21452 398 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 RXRGP48443 463 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 TAS2R38P59533 333 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 FKBP3Q00688 224 aaKnown RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 LGI2Q8N0V4 545 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 GANCQ8TET4 914 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 CCDC47Q96A33 483 aaKnown RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 SCML1Q9UN30 329 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 ATP6V1DQ9Y5K8 247 aa14.75□□□□□ -0.05
CPSF1-201ENST00000526271 KIF26BQ2KJY2 2108 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 EDDM13A0A1B0GTR0 161 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 I6L893 689 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-201ENST00000526271 TRIM38O00635 465 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 PMM2O15305 246 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 SRPRAP08240 638 aaKnown RBP14.74□□□□□ -0.05
CPSF1-201ENST00000526271 TBXAS1P24557 533 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-201ENST00000526271 C21orf59P57076 290 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 ECT2LQ008S8 904 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 NNTQ13423 1086 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 RTP5Q14D33 572 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 PROX2Q3B8N5 592 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 AGBL4Q5VU57 503 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 SLC25A45Q8N413 288 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 OR14C36Q8NHC7 312 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 SLC4A5Q9BY07 1137 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 DNAI2Q9GZS0 605 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 AASDHPPTQ9NRN7 309 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 NCKAP1Q9Y2A7 1128 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 OR51B4Q9Y5P0 310 aa14.74□□□□□ -0.05
CPSF1-201ENST00000526271 COL6A6A6NMZ7 2263 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 KCNU1A8MYU2 1149 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 E9PAM4 449 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 DFNA5O60443 496 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 SDC3O75056 442 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 ITGAVP06756 1048 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 PDGFRAP16234 1089 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 C5AR1P21730 350 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 MAT2AP31153 395 aaKnown RBP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 GGCXP38435 758 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 INSM1Q01101 510 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 SEMG2Q02383 582 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 CENPCQ03188 943 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 CDH18Q13634 790 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 OTUD1Q5VV17 481 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 TTI2Q6NXR4 508 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 SND1Q7KZF4 910 aaKnown RBP eCLIP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 CCAR2Q8N163 923 aaKnown RBP14.73□□□□□ -0.05
CPSF1-201ENST00000526271 PPM1KQ8N3J5 372 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 WDTC1Q8N5D0 677 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 RFFLQ8WZ73 363 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 SERAC1Q96JX3 654 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 SERPINB11Q96P15 392 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 NT5C1BQ96P26 610 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 OMDQ99983 421 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 ERVMER34-1Q9H9K5 563 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 DOCK4Q8N1I0 1966 aa14.73□□□□□ -0.05
CPSF1-201ENST00000526271 LY6G6EA0A0G2JKS1 128 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 LRRC72A6NJI9 287 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 E5RJQ4 531 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 PLRG1O43660 514 aaKnown RBP14.72□□□□□ -0.05
CPSF1-201ENST00000526271 FBXO21O94952 628 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 TRUB2O95900 331 aaKnown RBP14.72□□□□□ -0.05
CPSF1-201ENST00000526271 CTSLP07711 333 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 JUPP14923 745 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 ABCG1P45844 678 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 PLK1P53350 603 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 ST8SIA6P61647 398 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 YWHAEP62258 255 aaKnown RBP14.72□□□□□ -0.05
CPSF1-201ENST00000526271 APBA1Q02410 837 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 CNTN1Q12860 1018 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 ISM2Q6H9L7 571 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 NAPEPLDQ6IQ20 393 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 BEND5Q7L4P6 421 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 C14orf80Q86SX3 495 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 ERICH1Q86X53 443 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 TMEM145Q8NBT3 493 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 SNIP1Q8TAD8 396 aaKnown RBP14.72□□□□□ -0.05
CPSF1-201ENST00000526271 METTL14Q9HCE5 456 aaKnown RBP14.72□□□□□ -0.05
CPSF1-201ENST00000526271 GDF3Q9NR23 364 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 UCKL1Q9NWZ5 548 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 U3KQA8 63 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 RP1P56715 2156 aa14.72□□□□□ -0.05
CPSF1-201ENST00000526271 TRPM6Q9BX84 2022 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 CYSRT1A8MQ03 144 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 BECN2A8MW95 431 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 PPP1R3GB7ZBB8 358 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 BRINP1O60477 761 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 MT-CO1P00395 513 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms