RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 LDB3O75112 727 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 DDNO94850 711 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 NTSR2O95665 410 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 SLC16A2P36021 539 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 ADPRHP54922 357 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 TAS2R50P59544 299 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 DSC1Q08554 894 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 ALG10Q5BKT4 473 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 ALG10BQ5I7T1 473 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 C8orf82Q6P1X6 216 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.51□□□□□ -1.691e-9■■■□□ 15.9
CSDE1-210ENST00000525878 TTC30AQ86WT1 665 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 CLIP4Q8N3C7 705 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 ADAD1Q96M93 576 aaKnown RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 OSBPL5Q9H0X9 879 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 ZNF304Q9HCX3 659 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 SCN5AQ14524 2016 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 NTN3O00634 580 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 PCDH17O14917 1159 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 GRID2O43424 1007 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 CER1O95813 267 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 ALDOAP04075 364 aaKnown RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 FCGR1AP12314 374 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 CHRNB2P17787 502 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 ARL13BQ3SXY8 428 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 ERAP2Q6P179 960 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 BICD2Q8TD16 824 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 ZNF419Q96HQ0 510 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 CATSPERBQ9H7T0 1116 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 STARD7Q9NQZ5 370 aa4.5□□□□□ -1.69
CSDE1-210ENST00000525878 ERRFI1Q9UJM3 462 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-210ENST00000525878 MCIDASD6RGH6 385 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 GLP2RO95838 553 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 PRSS2P07478 247 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 TNFSF8P32971 234 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 PMS2P54278 862 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 COASYQ13057 564 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 GRM4Q14833 912 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 TDRD12Q587J7 1177 aaKnown RBP4.49□□□□□ -1.69
CSDE1-210ENST00000525878 HIBCHQ6NVY1 386 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-210ENST00000525878 Q6ZSV7 163 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 DGKHQ86XP1 1220 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 CAMK1DQ8IU85 385 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 FOXP4Q8IVH2 680 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-210ENST00000525878 B3GNT4Q9C0J1 378 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 NECTIN3Q9NQS3 549 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 SLC52A1Q9NWF4 448 aa4.49□□□□□ -1.69
CSDE1-210ENST00000525878 LINC01565O15544 149 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 ZBTB11O95625 1053 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-210ENST00000525878 ANXA6P08133 673 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 ZNF12P17014 697 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 CHRNA5P30532 468 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 RHAGQ02094 409 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 SLC35G1Q2M3R5 365 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 AAGABQ6PD74 315 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 ZNF367Q7RTV3 350 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 TRABD2AQ86V40 505 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 FAM217AQ8IXS0 508 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 TXLNBQ8N3L3 684 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 BRI3BPQ8WY22 251 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 POLDIP3Q9BY77 421 aaKnown RBP4.48□□□□□ -1.69
CSDE1-210ENST00000525878 FRMD8Q9BZ67 464 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-210ENST00000525878 DDX31Q9H8H2 851 aaKnown RBP4.48□□□□□ -1.69
CSDE1-210ENST00000525878 FBXO4Q9UKT5 387 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 RAI2Q9Y5P3 530 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 SLC4A4Q9Y6R1 1079 aa4.48□□□□□ -1.69
CSDE1-210ENST00000525878 HARSP12081 509 aaKnown RBP4.47□□□□□ -1.69
CSDE1-210ENST00000525878 STAT1P42224 750 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 TRAF2Q12933 501 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 PMS2P11Q13670 270 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 ARL6IP4Q66PJ3 421 aaKnown RBP4.47□□□□□ -1.69
CSDE1-210ENST00000525878 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 KLBQ86Z14 1044 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 FAM185AQ8N0U4 392 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 KLHL31Q9H511 634 aa4.47□□□□□ -1.69
CSDE1-210ENST00000525878 DENND3A2RUS2 1198 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 MS4A18H0YCH9 400 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 VWA5AO00534 786 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 KIF3BO15066 747 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 SLC16A5O15375 505 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 FGF18O76093 207 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 PEPDP12955 493 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 ATF3P18847 181 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 GNLYP22749 145 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-210ENST00000525878 ZBTB16Q05516 673 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 EEF1A2Q05639 463 aaKnown RBP4.46□□□□□ -1.7
CSDE1-210ENST00000525878 POU5F1BQ06416 359 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 PKP1Q13835 747 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 HNF4GQ14541 408 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 FSCBQ5H9T9 825 aa4.46□□□□□ -1.7
CSDE1-210ENST00000525878 VWA5B1Q5TIE3 1220 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms