RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ANKRD13BQ86YJ7 626 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 C2CD5Q86YS7 1000 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-215ENST00000525241 TMEM57Q8N5G2 664 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 MYRIPQ8NFW9 859 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 DENND1AQ8TEH3 1009 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 KCNJ9Q92806 393 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 SCLT1Q96NL6 688 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 TUBB6Q9BUF5 446 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 CLPBQ9H078 707 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 ARL15Q9NXU5 204 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 KLQ9UEF7 1012 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 UTS2RQ9UKP6 389 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 AGO2Q9UKV8 859 aaKnown RBP4.81□□□□□ -1.64
CD44-215ENST00000525241 TNFSF13BQ9Y275 285 aa4.81□□□□□ -1.64
CD44-215ENST00000525241 ZNF335Q9H4Z2 1342 aaPredicted RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 A0A0G2JK05 382 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 KIR2DS5A0A0G2JLQ3 304 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 CXorf65A6NEN9 183 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 STX16-NPEPL1H3BU86 382 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 KIR2DS3K7RE56 304 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 STX16O14662 325 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 TLX3O43711 291 aaPredicted RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 MOSPD3O75425 235 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 NFATC1O95644 943 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 FGBP02675 491 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 HSD3B1P14060 373 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 ARSAP15289 507 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 ZNF81P51508 661 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 RHAGQ02094 409 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 SRSF1Q07955 248 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD44-215ENST00000525241 MTX1Q13505 466 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 THOC5Q13769 683 aaKnown RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 RABEP1Q15276 862 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 RBMS2Q15434 407 aaKnown RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 ANKRD45Q5TZF3 282 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 LRIG3Q6UXM1 1119 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 KLBQ86Z14 1044 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 SCN4BQ8IWT1 228 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 NANOGP1Q8N7R0 232 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 LINS1Q8NG48 757 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 C2CD4CQ8TF44 421 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 TRIM63Q969Q1 353 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 COG8Q96MW5 612 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 TMEM79Q9BSE2 394 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
CD44-215ENST00000525241 TRIM31Q9BZY9 425 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 HEY2Q9UBP5 337 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 SLC8A2Q9UPR5 921 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 DNAJC16Q9Y2G8 782 aa4.8□□□□□ -1.64
CD44-215ENST00000525241 ARID4BQ4LE39 1312 aaPredicted RBP4.79□□□□□ -1.64
CD44-215ENST00000525241 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PLEKHD1A6NEE1 506 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 ZNF814B7Z6K7 855 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PPEF2O14830 753 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PRPF4O43172 522 aaKnown RBP eCLIP4.79□□□□□ -1.64
CD44-215ENST00000525241 CDK4P11802 303 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PRF1P14222 555 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PAPOLAP51003 745 aaKnown RBP4.79□□□□□ -1.64
CD44-215ENST00000525241 TMEM95Q3KNT9 176 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 CTXN3Q4LDR2 81 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 GORABQ5T7V8 394 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 TTLL5Q6EMB2 1281 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 ISM2Q6H9L7 571 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 ANKRD18AQ8IVF6 992 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 DDIASQ8IXT1 998 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 VPS52Q8N1B4 723 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 TMEM217Q8N7C4 229 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 EME1Q96AY2 570 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 GCC1Q96CN9 775 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 ZSCAN31Q96LW9 406 aaPredicted RBP4.79□□□□□ -1.64
CD44-215ENST00000525241 PYM1Q9BRP8 204 aaKnown RBP4.79□□□□□ -1.64
CD44-215ENST00000525241 Q9N2J8 555 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 THAP1Q9NVV9 213 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 TMEM248Q9NWD8 314 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 SLC25A13Q9UJS0 675 aa4.79□□□□□ -1.64
CD44-215ENST00000525241 A0A1W2PPC1 479 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 DPPA5A6NC42 116 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 SAC3D1A6NKF1 404 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 INO80B-WBP1J3KQ70 363 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 RHODO00212 210 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 MSI1O43347 362 aaKnown RBP4.78□□□□□ -1.64
CD44-215ENST00000525241 NEURL1O76050 574 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 CNPP09543 421 aaKnown RBP4.78□□□□□ -1.64
CD44-215ENST00000525241 CKMT1AP12532 417 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 TYK2P29597 1187 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 CIITAP33076 1130 aa4.78□□□□□ -1.64
CD44-215ENST00000525241 STAT1P42224 750 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms