RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 NTAN1Q96AB6 310 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TBC1D31Q96DN5 1066 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ALG14Q96F25 216 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 HMCESQ96FZ2 354 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 LMLNQ96KR4 655 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PSMB7Q99436 277 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 FAM118BQ9BPY3 351 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 IRX2Q9BZI1 471 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TPSD1Q9BZJ3 242 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZYG11BQ9C0D3 744 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC39A8Q9C0K1 460 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 OSBPL2Q9H1P3 480 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TNKS2Q9H2K2 1166 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 NOL6Q9H6R4 1146 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PCDH18Q9HCL0 1135 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CD93Q9NPY3 652 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ELOVL2Q9NXB9 296 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 UVRAGQ9P2Y5 699 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 VPS28Q9UK41 221 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 FBXO10Q9UK96 956 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 MRPS17Q9Y2R5 130 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ALG6Q9Y672 507 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CAPN6Q9Y6Q1 641 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 NUP210Q8TEM1 1887 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF638Q14966 1978 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 IGLV3-10A0A075B6K4 115 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 TCRBV21S2A2A0A5A6 115 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 TTC24A2A3L6 582 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CHURC1-FNTBB4DL54 471 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RASA4BC9J798 803 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 H3BRJ5 948 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 J3KR12 359 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RNF103O00237 685 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 DFFAO00273 331 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PLK4O00444 970 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 DCLK1O15075 740 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 NCAM2O15394 837 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGAP6O43182 974 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RASA4O43374 803 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 LAMTOR5O43504 91 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CLDN11O75508 207 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 MTA2O94776 668 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 EPHX1P07099 455 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CHRM1P11229 460 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 KRT10P13645 584 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HOXB2P14652 356 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RHOQP17081 205 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 KDELR1P24390 212 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 GKP32189 559 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PCK1P35558 622 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ETFBP38117 255 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ARL4AP40617 200 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 TNFRSF4P43489 277 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 FNTBP49356 437 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ARSEP51690 589 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CLCN5P51795 746 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 METAP1P53582 386 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CDH4P55283 916 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 GNA12Q03113 381 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ADCY2Q08462 1091 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SCAPQ12770 1279 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SEMA3BQ13214 749 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 DPYSL3Q14195 570 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 LRRC32Q14392 662 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 DMC1Q14565 340 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ANGPT1Q15389 498 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HADHQ16836 314 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PTPRNQ16849 979 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PLEKHG6Q3KR16 790 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 MPP7Q5T2T1 576 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ANO7Q6IWH7 933 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 C1orf228Q6PIY5 440 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 MFSD7Q6UXD7 560 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SERPINA13PQ6UXR4 307 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 BMP8AQ7Z5Y6 402 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 NLRP14Q86W24 1093 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CCDC50Q8IVM0 306 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 C1orf210Q8IVY1 113 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 AHI1Q8N157 1196 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PGBD3Q8N328 593 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 DEFB119Q8N690 84 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 NPWQ8N729 165 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 FRMD1Q8N878 549 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 NIPA2Q8N8Q9 360 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PRSS33Q8NF86 280 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 OR6K2Q8NGY2 324 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 RLN3Q8WXF3 142 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CLDN23Q96B33 292 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HAUS1Q96CS2 278 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PDLIM2Q96JY6 352 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 C1orf74Q96LT6 269 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CSPG4P5Q96PW8 444 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 NELL2Q99435 816 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms