RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MAK16Q9BXY0 300 aaKnown RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 NEUROG2Q9H2A3 272 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 DPH5Q9H2P9 285 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 PCDH18Q9HCL0 1135 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 IGSF9Q9P2J2 1179 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 HSFX1Q9UBD0 423 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ANAPC5Q9UJX4 755 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ADAM21Q9UKJ8 722 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 DNPEPQ9ULA0 475 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 TPX2Q9ULW0 747 aaKnown RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 ZNF148Q9UQR1 794 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 SNX24Q9Y343 169 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 USP3Q9Y6I4 520 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 MIA3Q5JRA6 1907 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ANAPC1Q9H1A4 1944 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 TRIOO75962 3097 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 HELZP42694 1942 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 HHLA1C9JL84 531 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TULP2O00295 520 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 MTSS1O43312 755 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 RIPK2O43353 540 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 PI15O43692 258 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TTC4O95801 387 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 AGTP01019 485 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 LTFP02788 710 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 KRT10P13645 584 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 BDNFP23560 247 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 IL4RP24394 825 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 L1CAMP32004 1257 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ARL4AP40617 200 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 KCNJ1P48048 391 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 RGS7P49802 495 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TKTL1P51854 596 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 EPHA5P54756 1037 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 CDK16Q00536 496 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 NRG1Q02297 640 aaPredicted RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 ZNF844Q08AG5 666 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 KRT81Q14533 505 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TRADDQ15628 312 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TAF12Q16514 161 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ARL13BQ3SXY8 428 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ATP13A4Q4VNC1 1196 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ANKRD20A8PQ5CZ79 823 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 BRMS1LQ5PSV4 323 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 C6orf118Q5T5N4 469 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 GPR158Q5T848 1215 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 RNASEH2BQ5TBB1 312 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 ARMC3Q5W041 872 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 CWF19L1Q69YN2 538 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 TXNRD3NBQ6F5E7 133 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 KDM7AQ6ZMT4 941 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 RTL10Q7L3V2 364 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 DDX42Q86XP3 938 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS11-201ENST00000524454 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 PPIL6Q8IXY8 311 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ARHGAP18Q8N392 663 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 FBXL6Q8N531 539 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 PLD5Q8N7P1 536 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TMEM105Q8N8V8 129 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TTC16Q8NEE8 873 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ZSCAN18Q8TBC5 510 aaPredicted RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 SPPL2BQ8TCT7 592 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ATG4AQ8WYN0 398 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 PSMG2Q969U7 264 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 LRRC39Q96DD0 335 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 PIWIL1Q96J94 861 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 C8orf48Q96LL4 319 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 CFAP57Q96MR6 1250 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 SERPINB12Q96P63 405 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 SMOQ99835 787 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 CCDC77Q9BR77 488 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 MED10Q9BTT4 135 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 SNRNP25Q9BV90 132 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 CALN1Q9BXU9 219 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 EPB41L4BQ9H329 900 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ATXN3LQ9H3M9 355 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 MFSD1Q9H3U5 465 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 RETREG1Q9H6L5 497 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 FAM204AQ9H8W3 233 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ZWILCHQ9H900 591 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 CNOT10Q9H9A5 744 aaKnown RBP7.29□□□□□ -1.24
VPS11-201ENST00000524454 TMBIM4Q9HC24 238 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 TMEM30AQ9NV96 361 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 DONSONQ9NYP3 566 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 VPS18Q9P253 973 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 PAK5Q9P286 719 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 FZD10Q9ULW2 581 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 MAFFQ9ULX9 164 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 AP4E1Q9UPM8 1137 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
VPS11-201ENST00000524454 FAM92AA1XBS5 289 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 SLC38A8A6NNN8 435 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 E7ESA3 106 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 H3BRJ5 948 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ZNF197O14709 1029 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 CHADO15335 359 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 PRAMEF12O95522 483 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms