RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 BCKDHBP21953 392 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 RRM1P23921 792 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 OXTRP30559 389 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 HNRNPH3P31942 346 aaKnown RBP21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 HDAC4P56524 1084 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 HGSNATQ68CP4 663 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 FAM131BQ86XD5 332 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 FNIP1Q8TF40 1166 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 PRCCQ92733 491 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 TRIM11Q96F44 468 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 FEM1AQ9BSK4 669 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 ISCUQ9H1K1 167 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 PARD6AQ9NPB6 346 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 VPS45Q9NRW7 570 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 SCML1Q9UN30 329 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 ERVW-1Q9UQF0 538 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 E9PAM4 449 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 DDX3XO00571 662 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 MAP3K13O43283 966 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 GYPCP04921 128 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 SERPING1P05155 500 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 NNMTP40261 264 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 ATXN1P54253 815 aaKnown RBP21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 SPEM2Q0P670 501 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 TRIM14Q14142 442 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 C15orf59Q2T9L4 293 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 MANEALQ5VSG8 457 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 PEAR1Q5VY43 1037 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 VPS36Q86VN1 386 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 KIAA2013Q8IYS2 634 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 FAM172AQ8WUF8 416 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 RLN3Q8WXF3 142 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 SIPA1Q96FS4 1042 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 XPO4Q9C0E2 1151 aaKnown RBP21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 PCED1AQ9H1Q7 454 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 PRSS16Q9NQE7 514 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 TAS2R14Q9NYV8 317 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 ZNF212Q9UDV6 495 aa21.49■■□□□ 1.03
TRAPPC9-215ENST00000524162 CNOT1A5YKK6 2376 aaKnown RBP21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 MPLP40238 635 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 MAMLD1Q13495 774 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 C6orf118Q5T5N4 469 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 RNF219Q5W0B1 726 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 DCUN1D2Q6PH85 259 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 CIR1Q86X95 450 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 APCDD1Q8J025 514 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 ZYG11BQ9C0D3 744 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 RSPH9Q9H1X1 276 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 ARRDC1-AS1Q9H2J1 176 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 OR12D3Q9UGF7 316 aa21.48■■□□□ 1.03
TRAPPC9-215ENST00000524162 NUMA1Q14980 2115 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 EDDM13A0A1B0GTR0 161 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 ILVBLA1L0T0 632 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 FTLP02792 175 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 HLA-EP13747 358 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 MZF1P28698 734 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 CD6P30203 668 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 TPMTP51580 245 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 IRAK1P51617 712 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 RPL7AP62424 266 aaKnown RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 SFSWAPQ12872 951 aaKnown RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 CDO1Q16878 200 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 ALFQ53S48 1182 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 SH3PXD2AQ5TCZ1 1133 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 SPECC1LQ69YQ0 1117 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 PRR23CQ6ZRP0 262 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 CADM4Q8NFZ8 388 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 FOXJ1Q92949 421 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 ZNF419Q96HQ0 510 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 MCEEQ96PE7 176 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 NCAPGQ9BPX3 1015 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 C2orf49Q9BVC5 232 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 WSB2Q9NYS7 404 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 USP18Q9UMW8 372 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 HS3ST2Q9Y278 367 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 INVSQ9Y283 1065 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 SCINQ9Y6U3 715 aa21.47■■□□□ 1.03
TRAPPC9-215ENST00000524162 EIF3CLB5ME19 914 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 ATP9BO43861 1147 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 CNTN5O94779 1100 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 ACADMP11310 421 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 KRT83P78385 493 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 KIAA1324Q6UXG2 1013 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 RABEPKQ7Z6M1 372 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 PHLDB2Q86SQ0 1253 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 SYT12Q8IV01 421 aa21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 EIF3CQ99613 913 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 MRPL47Q9HD33 250 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 EVLQ9UI08 416 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC9-215ENST00000524162 FAM170AA1A519 330 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMEM191CA6NGB0 347 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 CCP110O43303 1012 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 GJB6O95452 261 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 SKILP12757 684 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 OR1E1P30953 314 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 L1CAMP32004 1257 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 HTR7P34969 479 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 ETFBP38117 255 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 GGCXP38435 758 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 MAPKAPK2P49137 400 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms