RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ACAD9Q9H845 621 aa4.29□□□□□ -1.72
SKP1-212ENST00000523966 TMEM160Q9NX00 188 aa4.29□□□□□ -1.72
SKP1-212ENST00000523966 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
SKP1-212ENST00000523966 TMEM98Q9Y2Y6 226 aa4.29□□□□□ -1.72
SKP1-212ENST00000523966 AOX1Q06278 1338 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 MANSC4A6NHS7 340 aaPredicted RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 NPIPB13A6NJU9 1138 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 SH2D7A6NKC9 451 aaPredicted RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 LINC01548A6NM66 108 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 C16orf96A6NNT2 1141 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 TISP43B9A030 160 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 NPIPB4C9JG80 1138 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 MSI1O43347 362 aaKnown RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 AKAP8O43823 692 aaKnown RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 HBP1O60381 514 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 TULP3O75386 442 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 PLAUP00749 431 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 SLPIP03973 132 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 HNRNPA1P09651 372 aaKnown RBP eCLIP4.28□□□□□ -1.72
SKP1-212ENST00000523966 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 LYL1P12980 280 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 RPS6KB1P23443 525 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 CERS1P27544 350 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 CHRNA5P30532 468 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 CIITAP33076 1130 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 IDUAP35475 653 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 CCR5P51681 352 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 GHRHRQ02643 423 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 BYSLQ13895 437 aaKnown RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 NAA25Q14CX7 972 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 ARL13AQ5H913 290 aaPredicted RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 FAAH2Q6GMR7 532 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 MTFR2Q6P444 385 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 SLC30A9Q6PML9 568 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 LRIG3Q6UXM1 1119 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 CYB5R4Q7L1T6 521 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 RSRC2Q7L4I2 434 aaKnown RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 MAATS1Q7Z4T9 603 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 GALNT7Q86SF2 657 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 ADGRG6Q86SQ4 1221 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 ADGRG3Q86Y34 549 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 BRSK2Q8IWQ3 736 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 TSPYL6Q8N831 410 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 C8orf58Q8NAV2 365 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 BCAS4Q8TDM0 211 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 CUL5Q93034 780 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 ATP2A3Q93084 1043 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 NPLQ9BXD5 320 aaPredicted RBP4.28□□□□□ -1.72
SKP1-212ENST00000523966 ARHGAP39Q9C0H5 1083 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.723e-12■■■■□ 26.6
SKP1-212ENST00000523966 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 VEZTQ9HBM0 779 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 DTX4Q9Y2E6 619 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 PKP3Q9Y446 797 aa4.28□□□□□ -1.72
SKP1-212ENST00000523966 WDR17Q8IZU2 1322 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 RRHO14718 337 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 DHX16O60231 1041 aaKnown RBP4.27□□□□□ -1.73
SKP1-212ENST00000523966 PPFIA2O75334 1257 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 TUBB4AP04350 444 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 CPA2P48052 419 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 SOX2P48431 317 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 CYP2J2P51589 502 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 YPEL5P62699 121 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 SLC9C1Q4G0N8 1177 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 TMEM268Q5VZI3 342 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 AADACL2Q6P093 401 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 SLC22A25Q6T423 547 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 PCSK4Q6UW60 755 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 TFAP2DQ7Z6R9 452 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 IGFN1Q86VF2 1251 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 ZNF366Q8N895 744 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 PCYOX1LQ8NBM8 494 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 PPHLN1Q8NEY8 458 aaKnown RBP4.27□□□□□ -1.73
SKP1-212ENST00000523966 OR52N4Q8NGI2 321 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 ZFPM2Q8WW38 1151 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 ST8SIA4Q92187 359 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 MAP4K1Q92918 833 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
SKP1-212ENST00000523966 RNFT2Q96EX2 444 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 APOPT1Q96IL0 206 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 ZNF347Q96SE7 839 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 IFT27Q9BW83 186 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 MAF1Q9H063 256 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 PAIP1Q9H074 479 aaKnown RBP4.27□□□□□ -1.73
SKP1-212ENST00000523966 MROH8Q9H579 483 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 TTC12Q9H892 705 aaPredicted RBP4.27□□□□□ -1.73
SKP1-212ENST00000523966 PREBQ9HCU5 417 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 CD207Q9UJ71 328 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 HSF4Q9ULV5 492 aa4.27□□□□□ -1.73
SKP1-212ENST00000523966 KIF1CO43896 1103 aaKnown RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 C1QL1O75973 258 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 MBD4O95243 580 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 CBX6O95503 412 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 ARSAP15289 507 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms