RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FAM72CH0Y354 149 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 MYO1FO00160 1098 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 HRO43593 1189 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 RPP40O75818 363 aaKnown RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 LRIG2O94898 1065 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 LMNAP02545 664 aaKnown RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 EPHX1P07099 455 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 RHOQP17081 205 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 GABRG2P18507 467 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 PRKCHP24723 683 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 MIPP30301 263 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 OR1E1P30953 314 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 PCK1P35558 622 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 NNMTP40261 264 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ECT2LQ008S8 904 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 ERMARDQ5T6L9 678 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 FAM72AQ5TYM5 149 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 RNF219Q5W0B1 726 aaPredicted RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 FAM72DQ6L9T8 149 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 ZNF783Q6ZMS7 281 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 CEP68Q76N32 757 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 FAM72BQ86X60 149 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 PGBD3Q8N328 593 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ARFGAP1Q8N6T3 406 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ALG14Q96F25 216 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 EIF3CQ99613 913 aaKnown RBP12.87□□□□□ -0.35
CCNC-216ENST00000523961 EPAS1Q99814 870 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 EPC1Q9H2F5 836 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 CTTNBP2NLQ9P2B4 639 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ERVW-1Q9UQF0 538 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
CCNC-216ENST00000523961 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 LRCH4O75427 683 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 HLA-EP13747 358 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 CDC25BP30305 580 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 HTR7P34969 479 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 MAPKAPK2P49137 400 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 KRT83P78385 493 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 CAMK2GQ13555 558 aaPredicted RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 BYSLQ13895 437 aaKnown RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 SIM2Q14190 667 aaPredicted RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 CCDC170Q8IYT3 715 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 MYO19Q96H55 970 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 MRGPRX3Q96LB0 322 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 C2orf49Q9BVC5 232 aaPredicted RBP12.86□□□□□ -0.35
CCNC-216ENST00000523961 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 TMEM248Q9NWD8 314 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 USP18Q9UMW8 372 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 AP4E1Q9UPM8 1137 aa12.86□□□□□ -0.35
CCNC-216ENST00000523961 CREB3O43889 395 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 NDUFV2P19404 249 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 EPHB2P29323 1055 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 ETFBP38117 255 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 CTSOP43234 321 aaPredicted RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 ZNF135P52742 658 aaPredicted RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 SEMA3BQ13214 749 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 HNRNPA1L2Q32P51 320 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 BOLA3Q53S33 107 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 PRR23BQ6ZRT6 265 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 C11orf74Q86VG3 221 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 NLRP14Q86W24 1093 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 DCAF4L2Q8NA75 395 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SUMF1Q8NBK3 374 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 OR2T3Q8NH03 318 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 ERLEC1Q96DZ1 483 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 RPL10LQ96L21 214 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 MRGPRX1Q96LB2 322 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms