RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 VSIG8P0DPA2 414 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 COL8A1P27658 744 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CORO1AP31146 461 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CHKAP35790 457 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 PRPHP41219 470 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CD97P48960 835 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 METAP1P53582 386 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 PDE4CQ08493 712 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 MORC3Q14149 939 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CST6Q15828 149 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 C9orf64Q5T6V5 341 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 DTHD1Q6ZMT9 781 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CHST9Q7L1S5 443 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 VASH2Q86V25 355 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 IQCHQ86VS3 1027 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 TICAM1Q8IUC6 712 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 DENND1CQ8IV53 801 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 MMAAQ8IVH4 418 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 CPXM2Q8N436 756 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 ARL14Q8N4G2 192 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 WDR36Q8NI36 951 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 IFI44Q8TCB0 444 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 WFDC5Q8TCV5 224 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 GOLGA1Q92805 767 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 LMLNQ96KR4 655 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM129BQ96TA1 746 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZHX3Q9H4I2 956 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 KRT82Q9NSB4 513 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 ABCB8Q9NUT2 735 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 ACSL6Q9UKU0 697 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 NCKAP1Q9Y2A7 1128 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 PCDHGA7Q9Y5G6 932 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 K7ESM1 405 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 NEBLO76041 1014 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 HMBSP08397 361 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 TMEM191BP0C7N4 346 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ELAVL4P26378 380 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 HARS2P49590 506 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 SGSHP51688 502 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 CASP5P51878 434 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ARID5AQ03989 594 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 GOLGA8FQ08AF8 430 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 GOLGA8DPQ0D2H9 430 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 E2F5Q15329 346 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 C10orf120Q5SQS8 335 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 MBLAC2Q68D91 279 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 GUSBP11Q6P575 273 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 CRTC1Q6UUV9 634 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 TRAPPC11Q7Z392 1133 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 CCDC83Q8IWF9 413 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF276Q8N554 614 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 OR14C36Q8NHC7 312 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 DDI1Q8WTU0 396 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 HPS3Q969F9 1004 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ELMO3Q96BJ8 720 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 SMARCD1Q96GM5 515 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 MRGPRX3Q96LB0 322 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 FGFBP2Q9BYJ0 223 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 XYLT2Q9H1B5 865 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 FBXO44Q9H4M3 255 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 PCIF1Q9H4Z3 704 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 KLHL11Q9NVR0 708 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 SEL1LQ9UBV2 794 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 FZD4Q9ULV1 537 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 SCML1Q9UN30 329 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF510Q9Y2H8 683 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 DNHD1Q96M86 4753 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 CCDC168Q8NDH2 2452 aa9.24□□□□□ -0.93
TRAPPC9-212ENST00000521944 ESPL1Q14674 2120 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SCAMP1O15126 338 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 CCDC130P13994 396 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 RHOQP17081 205 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 GOT1P17174 413 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 GARTP22102 1010 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 TNFRSF8P28908 595 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 MAT2AP31153 395 aaKnown RBP9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC8A1P32418 973 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 CD70P32970 193 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 DRD3P35462 400 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 DDIT3P35638 169 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 KCNMA1Q12791 1236 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 POU4F2Q12837 409 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 OVGP1Q12889 678 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 DRAP1Q14919 205 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 CDKN3Q16667 212 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 DUOXA2Q1HG44 320 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 HNRNPA1L2Q32P51 320 aaKnown RBP9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 WDR72Q3MJ13 1102 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 POM121L1PQ3SYA9 428 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC45A4Q5BKX6 768 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 PERM1Q5SV97 790 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 RBM44Q6ZP01 1051 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms