RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 VPS4AQ9UN37 437 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PKP3Q9Y446 797 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 OVOL3O00110 214 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 MGST3O14880 152 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 AHCYL1O43865 530 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 FZD7O75084 574 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZBED4O75132 1171 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CNTN5O94779 1100 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 MT-CO3P00414 261 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADH4P08319 380 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 KRT4P19013 534 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CHMP24386 653 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 PSMA4P25789 261 aaKnown RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 GJC1P36383 396 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 STAT1P42224 750 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 GPD2P43304 727 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 EFNA5P52803 228 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CDH15P55291 814 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 WDR5P61964 334 aaKnown RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 BLOC1S1P78537 153 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ARHGAP8P85298 464 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 SETQ01105 290 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CBFBQ13951 182 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 TBC1D25Q3MII6 688 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 FBXO43Q4G163 708 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC9B1Q4ZJI4 515 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF667Q5HYK9 610 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 L1TD1Q5T7N2 865 aaKnown RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 TFAP2DQ7Z6R9 452 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADSSL1Q8N142 457 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF366Q8N895 744 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 LSMEM1Q8N8F7 131 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 PROKR1Q8TCW9 393 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 AKAP1Q92667 903 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 USP6NLQ92738 828 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 GPR78Q96P69 363 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 PLEKHG4BQ96PX9 1271 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 HTATIP2Q9BUP3 242 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CINPQ9BW66 212 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 FRMD8Q9BZ67 464 aaPredicted RBP3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC25A18Q9H1K4 315 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 MUC13Q9H3R2 512 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 USP29Q9HBJ7 922 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMEM248Q9NWD8 314 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 TBC1D29Q9UFV1 150 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADAM21Q9UKJ8 722 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 DTX4Q9Y2E6 619 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 HS3ST3A1Q9Y663 406 aa3.77□□□□□ -1.81
HMGN1P28-201ENST00000521340 CLIC1O00299 241 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 DSCR3O14972 297 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ANP32CO43423 234 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 GUCY1B2O75343 617 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SCGB1D1O95968 90 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ALDOAP04075 364 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADRB2P07550 413 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ALDOCP09972 364 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 WEE2P0C1S8 567 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 CYP2D6P10635 497 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 HOXB9P17482 250 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 PTGS2P35354 604 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 MLH1P40692 756 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SOX2P48431 317 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 EEFSECP57772 596 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 UFM1P61960 85 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 KLF10Q13118 480 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 TUBA3CQ13748 450 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 PKP1Q13835 747 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 BYSLQ13895 437 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 EIF4A2Q14240 407 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF169Q14929 603 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 TUBA3EQ6PEY2 450 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 RNF144BQ7Z419 303 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 GALNT7Q86SF2 657 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 VRK3Q8IV63 474 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 BRSK2Q8IWQ3 736 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 OR8H2Q8N162 312 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 TERB1Q8NA31 727 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 MAFAQ8NHW3 353 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF398Q8TD17 642 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 RAB40AQ8WXH6 277 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF347Q96SE7 839 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 MMS19Q96T76 1030 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 EYA3Q99504 573 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SFXN1Q9H9B4 322 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 PCDHB16Q9NRJ7 776 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SNX15Q9NRS6 342 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 NSMCE4AQ9NXX6 385 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 TAS2R10Q9NYW0 307 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 KCND2Q9NZV8 630 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 TESQ9UGI8 421 aaKnown RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLCO3A1Q9UIG8 710 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 ING1Q9UK53 422 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 SARDHQ9UL12 918 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 CAMK2AQ9UQM7 478 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 RABGAP1Q9Y3P9 1069 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 CLDN16Q9Y5I7 305 aa3.76□□□□□ -1.81
HMGN1P28-201ENST00000521340 A0A1W2PQF6 199 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 KCNJ18B7U540 433 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 RRHO14718 337 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms