RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TLR4O00206 839 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 PLK4O00444 970 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 LATO43561 262 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 CALCAP01258 141 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 IL1BP01584 269 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 MZF1P28698 734 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-204ENST00000521331 EPHA8P29322 1005 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-204ENST00000521331 NUDT1P36639 197 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 ABCG1P45844 678 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 OXCT1P55809 520 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 NXPH1P58417 271 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 SHBQ15464 509 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 SYPL2Q5VXT5 272 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 APCDD1Q8J025 514 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 STK40Q8N2I9 435 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 PTPRN2Q92932 1015 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 RPL10LQ96L21 214 aaKnown RBP15.37■□□□□ 0.05
PRKDC-204ENST00000521331 SPAG5Q96R06 1193 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 MED15Q96RN5 788 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 ERVMER34-1Q9H9K5 563 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 POPDC2Q9HBU9 364 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 KNTC1P50748 2209 aa15.37■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3DA0A087WVF3 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3IA0A087WXS9 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3EA0A087X179 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3KA0A087X1G2 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3FA6NER0 549 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3LB9A6J9 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 F5H5T6 163 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 SLC7A4O43246 635 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 MED7O43513 233 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3HP0C7X1 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 RXRGP48443 463 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ACADVLP49748 655 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ILKQ13418 452 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ZC3H12AQ5D1E8 599 aaKnown RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TTC39BQ5VTQ0 682 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3GQ6DHY5 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3CQ6IPX1 549 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 NAPEPLDQ6IQ20 393 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 FOXR2Q6PJQ5 311 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 IQCHQ86VS3 1027 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TBC1D3Q8IZP1 549 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 EID2Q8N6I1 236 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 TIGD1Q96MW7 591 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 PPP1R9BQ96SB3 815 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 XPO7Q9UIA9 1087 aaKnown RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
PRKDC-204ENST00000521331 COL5A1P20908 1838 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-204ENST00000521331 ASXL3Q9C0F0 2248 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 LOC400499M0QZD8 3231 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 KCNU1A8MYU2 1149 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 CBX4O00257 560 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 WNT9AO14904 365 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 MAGEC1O60732 1142 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 GNA14O95837 355 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 TRUB2O95900 331 aaKnown RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 IGLV3-25P01717 112 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 SLC2A3P11169 496 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 KRT5P13647 590 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 STK19P49842 368 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 VASPP50552 380 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 OVGP1Q12889 678 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 RABGAP1LQ5R372 815 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 FAM46CQ5VWP2 391 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 DENND1BQ6P3S1 775 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 TMEM110Q86TL2 294 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 PRPF39Q86UA1 669 aaKnown RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 MFSD2AQ8NA29 543 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 FRS2Q8WU20 508 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 OR8D1Q8WZ84 308 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 TSC1Q92574 1164 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 FAM131CQ96AQ9 280 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 KREMEN1Q96MU8 473 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 DCBLD2Q96PD2 775 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 BBC3Q96PG8 261 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-204ENST00000521331 THAP9Q9H5L6 903 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 DMTF1Q9Y222 760 aa15.35■□□□□ 0.05
PRKDC-204ENST00000521331 A0A1B0GVM2 712 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 BICDL2A1A5D9 508 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 TCAF2A6NFQ2 919 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 E5RJQ4 531 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
PRKDC-204ENST00000521331 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 DRD3P35462 400 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 PLK1P53350 603 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 PPP2CBP62714 309 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 PPP2CAP67775 309 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms