RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OGDHQ02218 1023 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 PLEKHA7Q6IQ23 1121 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 METTL3Q86U44 580 aaKnown RBP21.24■□□□□ 0.99
TRIM35-203ENST00000521253 CACUL1Q86Y37 369 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 GPR161Q8N6U8 529 aaKnown RBP21.24■□□□□ 0.99
TRIM35-203ENST00000521253 CCDC185Q8N715 623 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 KDM1BQ8NB78 822 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SIPA1Q96FS4 1042 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 RPL10LQ96L21 214 aaKnown RBP21.24■□□□□ 0.99
TRIM35-203ENST00000521253 FEM1AQ9BSK4 669 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 CNPY3Q9BT09 278 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 MTG2Q9H4K7 406 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SEMA4GQ9NTN9 838 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SUN2Q9UH99 717 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 ADAMTS1Q9UHI8 967 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SLCO3A1Q9UIG8 710 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 PCDHGA5Q9Y5G8 931 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 OR51B4Q9Y5P0 310 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 ABCA7Q8IZY2 2146 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 STK19P49842 368 aaPredicted RBP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 SULT2A1Q06520 285 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 CCDC6Q16204 474 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 HNRNPA1L2Q32P51 320 aaKnown RBP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 RNF219Q5W0B1 726 aaPredicted RBP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 SPECC1LQ69YQ0 1117 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 LPCAT2Q7L5N7 544 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 TFAP2DQ7Z6R9 452 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 TMEFF1Q8IYR6 380 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 PRCCQ92733 491 aaPredicted RBP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 MAGEB5Q9BZ81 275 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 OSBPL2Q9H1P3 480 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 USP36Q9P275 1121 aaKnown RBP21.23■□□□□ 0.99
TRIM35-203ENST00000521253 OR12D3Q9UGF7 316 aa21.23■□□□□ 0.99
TRIM35-203ENST00000521253 CKAP5Q14008 2032 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 TTC34A8MYJ7 566 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 RHOCP08134 193 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 MPLP40238 635 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 DHPSP49366 369 aaPredicted RBP21.22■□□□□ 0.99
TRIM35-203ENST00000521253 NRG1Q02297 640 aaPredicted RBP21.22■□□□□ 0.99
TRIM35-203ENST00000521253 CREB5Q02930 508 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 CSRP2Q16527 193 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 MANEALQ5VSG8 457 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 SLC36A4Q6YBV0 504 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 SETD3Q86TU7 594 aaPredicted RBP21.22■□□□□ 0.99
TRIM35-203ENST00000521253 NTAN1Q96AB6 310 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 ZNF653Q96CK0 615 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 PPP1R9BQ96SB3 815 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 ZYG11BQ9C0D3 744 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 MUC3BQ9H195 1237 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 ISCUQ9H1K1 167 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 FBRSQ9HAH7 460 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 ITM2CQ9NQX7 267 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 PPARGC1AQ9UBK2 798 aaKnown RBP21.22■□□□□ 0.99
TRIM35-203ENST00000521253 ZNF212Q9UDV6 495 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 CNOT8Q9UFF9 292 aaKnown RBP21.22■□□□□ 0.99
TRIM35-203ENST00000521253 VPS28Q9UK41 221 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 SPTBN4Q9H254 2564 aa21.22■□□□□ 0.99
TRIM35-203ENST00000521253 LAMA1P25391 3075 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 BCLAF3A2AJT9 711 aaKnown RBP21.21■□□□□ 0.99
TRIM35-203ENST00000521253 FAM72CH0Y354 149 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 SIN3BO75182 1162 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 C7P10643 843 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 PTGER3P43115 390 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 TPMTP51580 245 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 RPL6Q02878 288 aaKnown RBP21.21■□□□□ 0.99
TRIM35-203ENST00000521253 SCAPQ12770 1279 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 ARID5BQ14865 1188 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 SPDYCQ5MJ68 293 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 PLA2G2CQ5R387 149 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 C6orf118Q5T5N4 469 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 FAM72AQ5TYM5 149 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 FAM72DQ6L9T8 149 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 SCYL2Q6P3W7 929 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 ARMCX6Q7L4S7 300 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 TMC6Q7Z403 805 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 VPS36Q86VN1 386 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 FAM72BQ86X60 149 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 VSTM4Q8IW00 320 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 ARHGAP20Q9P2F6 1191 aa21.21■□□□□ 0.99
TRIM35-203ENST00000521253 CEP250Q9BV73 2442 aa21.2■□□□□ 0.99
TRIM35-203ENST00000521253 TMEM191CA6NGB0 347 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 AP5Z1O43299 807 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 MYBL1P10243 752 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 ACADMP11310 421 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 PSMA2P25787 234 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 OR1E1P30953 314 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 HNRNPH3P31942 346 aaKnown RBP21.2■□□□□ 0.98
TRIM35-203ENST00000521253 TRIM14Q14142 442 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 C9orf64Q5T6V5 341 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 SLFN11Q7Z7L1 901 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 DEFB119Q8N690 84 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 TRIM11Q96F44 468 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 PSMB7Q99436 277 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 TRIM7Q9C029 511 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 SMOC1Q9H4F8 434 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 MYO1AQ9UBC5 1043 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 NEU3Q9UQ49 428 aa21.2■□□□□ 0.98
TRIM35-203ENST00000521253 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms