RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 RFX6Q8HWS3 928 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 LRRC49Q8IUZ0 686 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 DENND1CQ8IV53 801 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ARID3BQ8IVW6 561 aaPredicted RBP8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 UMODL1-AS1Q8N2C9 162 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 CELF5Q8N6W0 485 aaKnown RBP8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ACTL9Q8TC94 416 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 SH3RF2Q8TEC5 729 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 FGF13Q92913 245 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 FATE1Q969F0 183 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 IGSF8Q969P0 613 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 E2F7Q96AV8 911 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZBTB9Q96C00 473 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 TLCD1Q96CP7 247 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 LRCH3Q96II8 777 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 RIPOR3Q96MK2 946 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZSWIM3Q96MP5 696 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ASB16Q96NS5 453 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ERP44Q9BS26 406 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZYG11BQ9C0D3 744 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 BRD8Q9H0E9 1235 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 SIK2Q9H0K1 926 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 RAB17Q9H0T7 212 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 SMPD4Q9NXE4 827 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 DTLQ9NZJ0 730 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 CFAP97Q9P2B7 532 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 TBC1D14Q9P2M4 693 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 AMACRQ9UHK6 382 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 CDH7Q9ULB5 785 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 R3HDM2Q9Y2K5 976 aaKnown RBP8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 NEU2Q9Y3R4 380 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 SNX10Q9Y5X0 201 aa8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 PRRC2BQ5JSZ5 2229 aaKnown RBP8.18□□□□□ -1.1
IGHV7-40-201ENST00000520963 DOCK6Q96HP0 2047 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 LAMA2P24043 3122 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 MYO9BQ13459 2157 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 CXorf51AA0A1B0GTR3 108 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 GOLGA6L7A0A1B0GV03 622 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 BCLAF3A2AJT9 711 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 HACD1B0YJ81 288 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 CLDN11O75508 207 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 PRAMEF12O95522 483 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 HMBSP08397 361 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 NUDT17P0C025 328 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 PECAM1P16284 738 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 NR1D1P20393 614 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 FCARP24071 287 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 MDH1P40925 334 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 NDST2P52849 883 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 VCPP55072 806 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 EIF3BP55884 814 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 YBEYP58557 167 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 OTUD4Q01804 1114 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 GALNT2Q10471 571 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SLC10A2Q12908 348 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 HLTFQ14527 1009 aaKnown RBP eCLIP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 RABGAP1LQ5R372 815 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 TTC27Q6P3X3 843 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZDHHC24Q6UX98 284 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZNF783Q6ZMS7 281 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SETD3Q86TU7 594 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 CHSY1Q86X52 802 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SH2D3CQ8N5H7 860 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 NPWQ8N729 165 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 HJURPQ8NCD3 748 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 ATL2Q8NHH9 583 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 RIN3Q8TB24 985 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 ZSCAN18Q8TBC5 510 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 P3H4Q92791 437 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 MAGOHBQ96A72 148 aaKnown RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 RTP4Q96DX8 246 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 PRICKLE1Q96MT3 831 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 TSGA13Q96PP4 275 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 CDX2Q99626 313 aaPredicted RBP8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 TMEM109Q9BVC6 243 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 FAM129AQ9BZQ8 928 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 EPB41L4BQ9H329 900 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 ETNK2Q9NVF9 386 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 GRHL1Q9NZI5 618 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 MARK1Q9P0L2 795 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 VANGL2Q9ULK5 521 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 CCL26Q9Y258 94 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 TBC1D30Q9Y2I9 924 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 SH3BP1Q9Y3L3 701 aa8.17□□□□□ -1.1
IGHV7-40-201ENST00000520963 A0A1B0GVM2 712 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 CFAP69A5D8W1 941 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 TCAF2A6NFQ2 919 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 MCF2LO15068 1137 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 MFSD11O43934 449 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 RBP3P10745 1247 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 MX2P20592 715 aa8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 STIP1P31948 543 aaKnown RBP8.16□□□□□ -1.1
IGHV7-40-201ENST00000520963 LSP1P33241 339 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms