RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 TBX20Q9UMR3 447 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 ANKRD18BA2A2Z9 1011 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 MBD3L5A6NJ08 208 aaPredicted RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 CLIC1O00299 241 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 TACR3P29371 465 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 LIFRP42702 1097 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 RBM5P52756 815 aaKnown RBP eCLIP4.5□□□□□ -1.69
SQLE-204ENST00000520493 CLNS1AP54105 237 aaKnown RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 NAP1L1P55209 391 aaKnown RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 RBM6P78332 1123 aaKnown RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 ID2Q02363 134 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 ZNF91Q05481 1191 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 DLGAP5Q15398 846 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 BAK1Q16611 211 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 PFKFB3Q16875 520 aaPredicted RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 GALNTL6Q49A17 601 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 AASDHQ4L235 1098 aaPredicted RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 AWAT1Q58HT5 328 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 WDR45BQ5MNZ6 344 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 NEK10Q6ZWH5 1172 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 RRAGAQ7L523 313 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 P3H2Q8IVL5 708 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 METTL25Q8N6Q8 603 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 PTGR2Q8N8N7 351 aaPredicted RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 SLC22A17Q8WUG5 538 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 MAP4K1Q92918 833 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 COQ8BQ96D53 544 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 EIF3CQ99613 913 aaKnown RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 TREX2Q9BQ50 279 aaPredicted RBP4.5□□□□□ -1.69
SQLE-204ENST00000520493 CCDC134Q9H6E4 229 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 VPS45Q9NRW7 570 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 FBXO28Q9NVF7 368 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 DNAJC16Q9Y2G8 782 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 TTLL3Q9Y4R7 772 aa4.5□□□□□ -1.69
SQLE-204ENST00000520493 LMTK3Q96Q04 1460 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 A0A087X0M5 115 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 A0A1B0GX30 115 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 A6NCN8 305 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 SLC38A8A6NNN8 435 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 NKX2-8O15522 239 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 USP12O75317 370 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 GUCY1B2O75343 617 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 CYP3A4P08684 503 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 RXRAP19793 462 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 SCP2P22307 547 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 RPS6KB1P23443 525 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 MCM5P33992 734 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 PSMC2P35998 433 aaKnown RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 PBX1P40424 430 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 TUBP50607 506 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 NR1H2P55055 460 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 RPS13P62277 151 aaKnown RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 HSF1Q00613 529 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 TLE3Q04726 772 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 CCDC15Q0P6D6 951 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 DNASE1L3Q13609 305 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 CBFBQ13951 182 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 TOMM20Q15388 145 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 AAK1Q2M2I8 961 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 ATG16L1Q676U5 607 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 FASTKD5Q7L8L6 764 aaKnown RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 FSIP1Q8NA03 581 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 GLMPQ8WWB7 406 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 CENPIQ92674 756 aaPredicted RBP4.49□□□□□ -1.69
SQLE-204ENST00000520493 C7orf26Q96N11 449 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 SIGLEC11Q96RL6 698 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 PIGSQ96S52 555 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 GPR63Q9BZJ6 419 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 MTMR4Q9NYA4 1195 aa4.49□□□□□ -1.69
SQLE-204ENST00000520493 VWA3AA6NCI4 1184 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 CYSRT1A8MQ03 144 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 CCER2I3L3R5 266 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 ADAM10O14672 748 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 KRT38O76015 456 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 TBX18O95935 607 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 MATN1P21941 496 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 PCP4P48539 62 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 NUCB1Q02818 461 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 TBL3Q12788 808 aaKnown RBP4.48□□□□□ -1.69
SQLE-204ENST00000520493 RBMS2Q15434 407 aaKnown RBP4.48□□□□□ -1.69
SQLE-204ENST00000520493 P3H1Q32P28 736 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 CBWD5Q5RIA9 395 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 AWAT2Q6E213 333 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 DENND1BQ6P3S1 775 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 ACSM6Q6P461 480 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 LRRC8DQ7L1W4 858 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 SYT13Q7L8C5 426 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 KRT27Q7Z3Y8 459 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 TECPR1Q7Z6L1 1165 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms