RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 E2F5Q15329 346 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 MAPRE1Q15691 268 aaKnown RBP26.32■■□□□ 1.8
COL13A1-213ENST00000520267 FAM26DQ5JW98 314 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 CERCAMQ5T4B2 595 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ITPRIPL1Q6GPH6 555 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 RWDD4Q6NW29 188 aaKnown RBP26.32■■□□□ 1.8
COL13A1-213ENST00000520267 KYAT3Q6YP21 454 aaKnown RBP26.32■■□□□ 1.8
COL13A1-213ENST00000520267 TEKT5Q96M29 485 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ARHGEF38Q9NXL2 777 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 UBP1Q9NZI7 540 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 MAGED2Q9UNF1 606 aaPredicted RBP26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ARHGAP42A6NI28 874 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 IRAK2O43187 625 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 SLC8A1P32418 973 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 SLC5A3P53794 718 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 N4BP2L1Q5TBK1 243 aaPredicted RBP26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ZCCHC23Q6ZST2 131 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 AGAP11Q8TF27 550 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 TBC1D10AQ9BXI6 508 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ARL8BQ9NVJ2 186 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 TTC3P53804 2025 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 OR4Q2P0C623 313 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 CST5P28325 142 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 GP5P40197 560 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 PDE1BQ01064 536 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 HSF5Q4G112 596 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 ARHGAP36Q6ZRI8 547 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 TMEM135Q86UB9 458 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 SPATA2LQ8IUW3 424 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 RAB3IL1Q8TBN0 382 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 VAT1Q99536 393 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 SFMBT1Q9UHJ3 866 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 ZCWPW2A0A1B0GU75 182 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 TMEM88BA6NKF7 163 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 ERI2A8K979 691 aaKnown RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 TRAFD1O14545 582 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 GLRA3O75311 464 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 SNNO75324 88 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 F7P08709 466 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 SKIP12755 728 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 GRIK1P39086 918 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 RASSF2P50749 326 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 ZBTB16Q05516 673 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 PPM1JQ5JR12 505 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 STXBP5Q5T5C0 1151 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 BEND5Q7L4P6 421 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 ARID3BQ8IVW6 561 aaPredicted RBP26.31■■□□□ 1.8
COL13A1-213ENST00000520267 USP33Q8TEY7 942 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 TXNDC16Q9P2K2 825 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 LNPEPQ9UIQ6 1025 aa26.31■■□□□ 1.8
COL13A1-213ENST00000520267 TNFRSF10BO14763 440 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 ATP9BO43861 1147 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 TYMPP19971 482 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 ANKRD20A4Q4UJ75 823 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 FASTKD1Q53R41 847 aaKnown RBP26.3■■□□□ 1.8
COL13A1-213ENST00000520267 BTBD8Q5XKL5 378 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 RTN4RL1Q86UN2 441 aaPredicted RBP26.3■■□□□ 1.8
COL13A1-213ENST00000520267 ZNF280BQ86YH2 543 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 CNTD1Q8N815 330 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 CPNE1Q99829 537 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 ABCC13Q9NSE7 274 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 MSI1O43347 362 aaKnown RBP26.3■■□□□ 1.8
COL13A1-213ENST00000520267 USP1O94782 785 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 TPH1P17752 444 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 PAX3P23760 479 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 GMPRP36959 345 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 YWHAHQ04917 246 aaPredicted RBP26.3■■□□□ 1.8
COL13A1-213ENST00000520267 FRMPD3Q5JV73 1810 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 GRTP1Q5TC63 336 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 OTOP3Q7RTS5 596 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 SCD5Q86SK9 330 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 LONP2Q86WA8 852 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 CASP10Q92851 521 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 MFSD3Q96ES6 412 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 TRIM62Q9BVG3 475 aa26.3■■□□□ 1.8
COL13A1-213ENST00000520267 MYO16Q9Y6X6 1858 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 VGLL3A8MV65 326 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 DFFAO00273 331 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 DDHD2O94830 711 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 KITP10721 976 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 PTPN4P29074 926 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 CYP2C18P33260 490 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 STX3Q13277 289 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 CCDC91Q7Z6B0 441 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 TTC7BQ86TV6 843 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.29■■□□□ 1.8
COL13A1-213ENST00000520267 AZIN2Q96A70 460 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 PTCD3Q96EY7 689 aaKnown RBP26.29■■□□□ 1.8
COL13A1-213ENST00000520267 AGAP2Q99490 1192 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 KCNK4Q9NYG8 393 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 DCDC2Q9UHG0 476 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 NUDT5Q9UKK9 219 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 ABT1Q9ULW3 272 aaKnown RBP26.29■■□□□ 1.8
COL13A1-213ENST00000520267 PCDHB8Q9UN66 801 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 L3MBTL1Q9Y468 752 aa26.29■■□□□ 1.8
COL13A1-213ENST00000520267 PLIN3O60664 434 aa26.28■■□□□ 1.8
COL13A1-213ENST00000520267 PAGE1O75459 146 aa26.28■■□□□ 1.8
COL13A1-213ENST00000520267 PRKCGP05129 697 aa26.28■■□□□ 1.8
COL13A1-213ENST00000520267 RPL10AP62906 217 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms