RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 MATN2O00339 956 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 SPTLC1O15269 473 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 UQCRBP14927 111 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 RNF43Q68DV7 783 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CBWD2Q8IUF1 395 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MED8Q96G25 268 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 KATNAL1Q9BW62 490 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MAPKAPK2P49137 400 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CBWD1Q9BRT8 395 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CLK4Q9HAZ1 481 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TIMM44O43615 452 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CNPP09543 421 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 AKAP5P24588 427 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 B3GALNT2Q8NCR0 500 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MAGEC3Q8TD91 643 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ACTRT1Q8TDG2 376 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ACAT2Q9BWD1 397 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 PDGFCQ9NRA1 345 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MRASO14807 208 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 AZGP1P25311 298 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TAF1CQ15572 869 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 SLC45A4Q5BKX6 768 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 C4orf22Q6V702 233 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MTMR8Q96EF0 704 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 FUCA2Q9BTY2 467 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ALDH1A2O94788 518 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ALDH4A1P30038 563 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MTX3Q5HYI7 312 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 FAM172AQ8WUF8 416 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 NT5MQ9NPB1 228 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 UBP1Q9NZI7 540 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TMCC3Q9ULS5 477 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 GNB5O14775 395 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MAPK1P28482 360 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 SBK1Q52WX2 424 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 GALNT15Q8N3T1 639 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF285Q96NJ3 590 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 WDR41Q9HAD4 459 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TUBGCP4Q9UGJ1 667 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MYL12BO14950 172 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 THPOP40225 353 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MRNIPQ6NTE8 343 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF614Q8N883 585 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CLPBQ9H078 707 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 RGS17Q9UGC6 210 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ERI2A8K979 691 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 LYNP07948 512 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CPA3P15088 417 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CAMK2GQ13555 558 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TDRD10Q5VZ19 366 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 HMBOX1Q6NT76 420 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 SETD9Q8NE22 299 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 DQX1Q8TE96 717 aaKnown RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ART5Q96L15 291 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 UBA2Q9UBT2 640 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF70Q9UC06 446 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 PRKAR1AP10644 381 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 TCF7P36402 384 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CEBPGP53567 150 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-206ENST00000520002 PRMT9Q6P2P2 845 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 MCFD2Q8NI22 146 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 HSPBAP1Q96EW2 488 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 CLPTM1LQ96KA5 538 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 RMND5AQ9H871 391 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
CSMD1-206ENST00000520002 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 SNX3O60493 162 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 KHDRBS3O75525 346 aaKnown RBP8.84□□□□□ -0.99
CSMD1-206ENST00000520002 ENDOD1O94919 500 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 ALADP13716 330 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 DLG4P78352 724 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 TMEM53Q6P2H8 277 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 GPRC5AQ8NFJ5 357 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 KBTBD8Q8NFY9 601 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 ARL8BQ9NVJ2 186 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 VANGL2Q9ULK5 521 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 C2orf71A6NGG8 1288 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 MAGEA2P43356 314 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 SPIRE1Q08AE8 756 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 CA9Q16790 459 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 LIN52Q52LA3 116 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 OLFML2AQ68BL7 652 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 CYP4V2Q6ZWL3 525 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-206ENST00000520002 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
CSMD1-206ENST00000520002 ENGASEQ8NFI3 743 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 FICDQ9BVA6 458 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 CROTQ9UKG9 612 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 PPLO60437 1756 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 NR4A1P22736 598 aa8.84□□□□□ -0.99
CSMD1-206ENST00000520002 GRIA3P42263 894 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms