RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TTBK2Q6IQ55 1244 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 FEZF2Q8TBJ5 459 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ASB9Q96DX5 294 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ADI1Q9BV57 179 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 SATB2Q9UPW6 733 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 FAM86B1E9PN63 330 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 AURKAO14965 403 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 PRKCGP05129 697 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 NCAM1P13591 858 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 PROZP22891 400 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 PHC1P78364 1004 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 KCNJ11Q14654 390 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 RFTN1Q14699 578 aaPredicted RBP13.83□□□□□ -0.19
PABPC1-208ENST00000519004 SLX4IPQ5VYV7 408 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 KRT39Q6A163 491 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.19
PABPC1-208ENST00000519004 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 XXYLT1Q8NBI6 393 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 TAS1R2Q8TE23 839 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 RMDN3Q96TC7 470 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 NEK6Q9HC98 313 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 COQ4Q9Y3A0 265 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.19
PABPC1-208ENST00000519004 C3orf70A6NLC5 250 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 CDK2AP1O14519 115 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 TRDMT1O14717 391 aaKnown RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 MSH4O15457 936 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 SEC14L2O76054 403 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 ZBTB7AO95365 584 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 AMHP03971 560 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 FYNP06241 537 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 IST1P53990 364 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 CSE1LP55060 971 aaKnown RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 PTK2BQ14289 1009 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 SLC36A3Q495N2 470 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 IQSEC1Q6DN90 963 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 TIFABQ6ZNK6 161 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 CHST15Q7LFX5 561 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 PIWIL3Q7Z3Z3 882 aaKnown RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 RALGPS2Q86X27 583 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-208ENST00000519004 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 PARP8Q8N3A8 854 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 TTC30BQ8N4P2 665 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 ZNF781Q8N8C0 355 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 FAM71DQ8N9W8 422 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 POMGNT1Q8WZA1 660 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 SNX19Q92543 992 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 SLC39A3Q9BRY0 314 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 PCDHAC1Q9H158 963 aa13.83□□□□□ -0.2
PABPC1-208ENST00000519004 FAM172BPA6NC97 362 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 USP17L10C9JJH3 530 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 F8VP50 259 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 ZBTB5O15062 677 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 SLC7A1P30825 629 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 PRKAA2P54646 552 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 CLCQ05315 142 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 ZNF543Q08ER8 600 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 MERTKQ12866 999 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 CARTPTQ16568 116 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 SLC22A16Q86VW1 577 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 TMEM174Q8WUU8 243 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 DUS3LQ96G46 650 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 YME1L1Q96TA2 773 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 IL12RB2Q99665 862 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 HSD17B14Q9BPX1 270 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 TCF7L2Q9NQB0 619 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 POLE4Q9NR33 117 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 MYH9P35579 1960 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 TCRBV3S1A0A5B6 114 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 ZSCAN5BA6NJL1 495 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 K7ENM7 598 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 PIK3R2O00459 728 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 CLIC3O95833 236 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 NAT2P11245 290 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 CYP19A1P11511 503 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 IFNA8P32881 189 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 SLC16A2P36021 539 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 LEPRP48357 1165 aaKnown RBP13.82□□□□□ -0.2
PABPC1-208ENST00000519004 P2RX3P56373 397 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 NOMO3P69849 1222 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 OCA2Q04671 838 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 CBLBQ13191 982 aa13.82□□□□□ -0.2
PABPC1-208ENST00000519004 BFSP2Q13515 415 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms