RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 AGTPBP1Q9UPW5 1226 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KIF16BQ96L93 1317 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CUL9Q8IWT3 2517 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ANKRD18BA2A2Z9 1011 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 hCG_1984214I3L0E3 225 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PSMD9O00233 223 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 STRNO43815 780 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CTNND1O60716 968 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZKSCAN1P17029 563 aaPredicted RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HDCP19113 662 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RGS2P41220 211 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ALDH7A1P49419 539 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 B4GALNT1Q00973 533 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IFIT5Q13325 482 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PLS1Q14651 629 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RAB30Q15771 203 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PGS1Q32NB8 556 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM63BQ5T3F8 832 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCDC30Q5VVM6 783 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MFSD14CQ5VZR4 134 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 VSTM1Q6UX27 236 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CATIPQ7Z7H3 387 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 IZUMO1Q8IYV9 350 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 FAM151AQ8WW52 585 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LPAR1Q92633 364 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MIB2Q96AX9 1013 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SMAD5Q99717 465 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GTPBP4Q9BZE4 634 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MORF4L1Q9UBU8 362 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZMYND8Q9ULU4 1186 aaPredicted RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SHOC2Q9UQ13 582 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MRPS17Q9Y2R5 130 aaKnown RBP3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCDC88AQ3V6T2 1871 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 AKAP11Q9UKA4 1901 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LAMA3Q16787 3333 aa3.32□□□□□ -1.88
ATP6V1C1-204ENST00000518959 UTYO14607 1347 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MROH7Q68CQ1 1323 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MROH5Q6ZUA9 1318 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CLRN2A0PK11 232 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KBTBD13C9JR72 458 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ENTPD3O75355 529 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 FRAT2O75474 233 aaPredicted RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SNUPNO95149 360 aaKnown RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NDUFB8O95169 186 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PAPSS2O95340 614 aaPredicted RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CSF1RP07333 972 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CD63P08962 238 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HSPA5P11021 654 aaKnown RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ADORA2AP29274 412 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ARRB2P32121 409 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SOX8P57073 446 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LTBQ06643 244 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DCTN1Q14203 1278 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KCNB1Q14721 858 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LY6KQ17RY6 165 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NADSYN1Q6IA69 706 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SCYL3Q8IZE3 742 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 GPRC5AQ8NFJ5 357 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 BRIX1Q8TDN6 353 aaKnown RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PLEKHF1Q96S99 279 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SCNM1Q9BWG6 230 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 UPF3BQ9BZI7 483 aaKnown RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TDRD3Q9H7E2 651 aaKnown RBP3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 AS3MTQ9HBK9 375 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM45AQ9NWC5 275 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MIS18AQ9NYP9 233 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CHPF2Q9P2E5 772 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LPAR3Q9UBY5 353 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 FAM50BQ9Y247 325 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PLEKHM1Q9Y4G2 1056 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PRUNE2Q8WUY3 3088 aa3.31□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ANKRD36CQ5JPF3 1778 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TCP10L2B9ZVM9 353 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 C19orf81C9J6K1 198 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 H3BUI4 141 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ZC3H11AO75152 810 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 UNC5CO95185 931 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 FGF2P09038 288 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HOXC6P09630 235 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 APEHP13798 732 aaKnown RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SLC5A1P13866 664 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TACR3P29371 465 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HOXA7P31268 230 aaPredicted RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 VIPR2P41587 438 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 P2RX3P56373 397 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RIPK4P57078 832 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CHRNDQ07001 517 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LMAN2Q12907 356 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PPIGQ13427 754 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MLC1Q15049 377 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCDC57Q2TAC2 916 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DENND2CQ68D51 928 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMED8Q6PL24 325 aaPredicted RBP3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KSR2Q6VAB6 950 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ATF7IPQ6VMQ6 1270 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LDHAL6AQ6ZMR3 332 aa3.3□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CERS3Q8IU89 383 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms