RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 UVRAGQ9P2Y5 699 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 ZNF212Q9UDV6 495 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 NEU3Q9UQ49 428 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 MYO18AQ92614 2054 aaKnown RBP22.61■■□□□ 1.21
VEGFA-217ENST00000518538 PRPSAP2O60256 369 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 LRCH4O75427 683 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 MIPP30301 263 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 OR1E1P30953 314 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 PCK1P35558 622 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 ECT2LQ008S8 904 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 SULT2A1Q06520 285 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 RWDD4Q6NW29 188 aaKnown RBP22.6■■□□□ 1.21
VEGFA-217ENST00000518538 PYROXD2Q8N2H3 581 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 KDM1BQ8NB78 822 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 HMGB4Q8WW32 186 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 PEBP4Q96S96 227 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 FEM1AQ9BSK4 669 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 BCCIPQ9P287 314 aaKnown RBP eCLIP22.6■■□□□ 1.21
VEGFA-217ENST00000518538 CTTNBP2NLQ9P2B4 639 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 ERVW-1Q9UQF0 538 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 OR51B4Q9Y5P0 310 aa22.6■■□□□ 1.21
VEGFA-217ENST00000518538 EIF3CLB5ME19 914 aaKnown RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 MYO1FO00160 1098 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 ZBTB24O43167 697 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 SYNCRIPO60506 623 aaKnown RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 SRPRAP08240 638 aaKnown RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 RHOQP17081 205 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 FECHP22830 423 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 ST8SIA6P61647 398 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 SEMA3BQ13214 749 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 ERMARDQ5T6L9 678 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 RNF219Q5W0B1 726 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 ZNF783Q6ZMS7 281 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 NLRP14Q86W24 1093 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 CCDC170Q8IYT3 715 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 MYO19Q96H55 970 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 BTBD6Q96KE9 485 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 MRGPRX3Q96LB0 322 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 EIF3CQ99613 913 aaKnown RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 EPAS1Q99814 870 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 SNRNP25Q9BV90 132 aaKnown RBP22.59■■□□□ 1.21
VEGFA-217ENST00000518538 MUC3BQ9H195 1237 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 IMPACTQ9P2X3 320 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 PCSK1NQ9UHG2 260 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 VPS28Q9UK41 221 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 USP18Q9UMW8 372 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 AP4E1Q9UPM8 1137 aa22.59■■□□□ 1.21
VEGFA-217ENST00000518538 ILVBLA1L0T0 632 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 HRO43593 1189 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 EPHX1P07099 455 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 HLA-EP13747 358 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 GABRG2P18507 467 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 CTSOP43234 321 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-217ENST00000518538 MAPKAPK2P49137 400 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 CYP4V2Q6ZWL3 525 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-217ENST00000518538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-217ENST00000518538 PSTKQ8IV42 348 aaKnown RBP22.58■■□□□ 1.21
VEGFA-217ENST00000518538 GAB3Q8WWW8 586 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 NKD2Q969F2 451 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-217ENST00000518538 TPSD1Q9BZJ3 242 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 EPC1Q9H2F5 836 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 TMEM248Q9NWD8 314 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 GPATCH2LQ9NWQ4 482 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 LCMT1Q9UIC8 334 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 INTUQ9ULD6 942 aa22.58■■□□□ 1.21
VEGFA-217ENST00000518538 CREB3O43889 395 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 HTR7P34969 479 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 SRSF5Q13243 272 aaKnown RBP22.57■■□□□ 1.2
VEGFA-217ENST00000518538 CAMK2GQ13555 558 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-217ENST00000518538 DAB2IPQ5VWQ8 1189 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 PGBD3Q8N328 593 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 ERLEC1Q96DZ1 483 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 DHX35Q9H5Z1 703 aaKnown RBP22.57■■□□□ 1.2
VEGFA-217ENST00000518538 DOCK4Q8N1I0 1966 aa22.57■■□□□ 1.2
VEGFA-217ENST00000518538 A0A0D9SEW6 157 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 RPP40O75818 363 aaKnown RBP22.56■■□□□ 1.2
VEGFA-217ENST00000518538 LCA5LO95447 670 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 NDUFV2P19404 249 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 EPHB2P29323 1055 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 CYLC1P35663 651 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-217ENST00000518538 NUMBP49757 651 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 VASPP50552 380 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-217ENST00000518538 KRT83P78385 493 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 USP39Q53GS9 565 aaKnown RBP22.56■■□□□ 1.2
VEGFA-217ENST00000518538 TMTC1Q8IUR5 882 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 ZNF366Q8N895 744 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 DCAF4L2Q8NA75 395 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 MRGPRX1Q96LB2 322 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 PSMB7Q99436 277 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 C2orf49Q9BVC5 232 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-217ENST00000518538 SUN2Q9UH99 717 aa22.56■■□□□ 1.2
VEGFA-217ENST00000518538 IL1R2P27930 398 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 NNMTP40261 264 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 TPI1P60174 286 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 GNA12Q03113 381 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 CA9Q16790 459 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 HNRNPA1L2Q32P51 320 aaKnown RBP22.55■■□□□ 1.2
VEGFA-217ENST00000518538 BOLA3Q53S33 107 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 RHOT2Q8IXI1 618 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 RTL3Q8N8U3 475 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms