RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CARNMT1Q8N4J0 409 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 KCTD13Q8WZ19 329 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 NDRG1Q92597 394 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 TTC9Q92623 222 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 TATDN2Q93075 761 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 FAM131CQ96AQ9 280 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 MMRN2Q9H8L6 949 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 ARHGAP20Q9P2F6 1191 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 CYTH4Q9UIA0 394 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 INTS6Q9UL03 887 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
TRAPPC9-203ENST00000517667 GOLGA6L7A0A1B0GV03 622 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 PRAMEF26H0Y7S4 382 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 TULP2O00295 520 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 PLRG1O43660 514 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 OPA1O60313 960 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 LUC7L3O95232 432 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 MYL1P05976 194 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 TBX4P57082 545 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 DAOAP59103 153 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 STK40Q8N2I9 435 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 PTPRN2Q92932 1015 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 GRAMD1AQ96CP6 724 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 PRICKLE1Q96MT3 831 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 ABCG4Q9H172 646 aa11.85□□□□□ -0.51
TRAPPC9-203ENST00000517667 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 LZTS3O60299 673 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 STX10O60499 249 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 DGKAP23743 735 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 MAT2AP31153 395 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 DRD3P35462 400 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 CSRP3P50461 194 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 MXI1P50539 228 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 DUSP3P51452 185 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 RPS24P62847 133 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 SULT2A1Q06520 285 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 NNTQ13423 1086 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 SLC12A1Q13621 1099 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 MS4A13Q5J8X5 152 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 FAM46CQ5VWP2 391 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 NADSYN1Q6IA69 706 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 GRAMD1CQ8IYS0 662 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 VCPIP1Q96JH7 1222 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 SERPINB11Q96P15 392 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 ASCL3Q9NQ33 180 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
TRAPPC9-203ENST00000517667 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 NEMP2A6NFY4 417 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 K7ENP7 123 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 RTN2O75298 545 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 LTFP02788 710 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 THEGLP0DJG4 465 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 LCP1P13796 627 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 CD19P15391 556 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 RBMS1P29558 406 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 ME1P48163 572 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 INO80CQ6PI98 192 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 MMS22LQ6ZRQ5 1243 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 SEMA4DQ92854 862 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 RPL10LQ96L21 214 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 DUSP23Q9BVJ7 150 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 NLGN3Q9NZ94 848 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 TJP2Q9UDY2 1190 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 TLR6Q9Y2C9 796 aa11.83□□□□□ -0.52
TRAPPC9-203ENST00000517667 DOCK9Q9BZ29 2069 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 C1QTNF3-AMACRE9PGA6 284 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 ALOX15BO15296 676 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 FFAR2O15552 330 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 VDRP11473 427 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 ADAM9Q13443 819 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 AGBL4Q5VU57 503 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
TRAPPC9-203ENST00000517667 TMEM145Q8NBT3 493 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms