RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CDC42EP1Q00587 391 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 TFF3Q07654 80 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 TRA2AQ13595 282 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 RAPSNQ13702 412 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 ANKRD1Q15327 319 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 NAB2Q15742 525 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SEPT7Q16181 437 aaKnown RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 DEFB133Q30KQ1 61 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 GLIPR1L2Q4G1C9 344 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 CTXN3Q4LDR2 81 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 ZC2HC1CQ53FD0 456 aaPredicted RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 AWAT1Q58HT5 328 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 IFIT1BQ5T764 474 aaKnown RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 FAM160B1Q5W0V3 765 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 FBXW10Q5XX13 1052 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SEZ6L2Q6UXD5 910 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SYNE3Q6ZMZ3 975 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 CCDC60Q8IWA6 550 aaPredicted RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 ADGRF4Q8IZF3 695 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 PNMA1Q8ND90 353 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 ART4Q93070 314 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SDCCAG3Q96C92 435 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 PDLIM2Q96JY6 352 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC22A12Q96S37 553 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 CYP2S1Q96SQ9 504 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 C22orf23Q9BZE7 217 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 EPS8L2Q9H6S3 715 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 UPF2Q9HAU5 1272 aaKnown RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 LY9Q9HBG7 655 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SGK2Q9HBY8 427 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 DMRT3Q9NQL9 472 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 DISC1Q9NRI5 854 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 TOMM22Q9NS69 142 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 OLAHQ9NV23 265 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 GPR83Q9NYM4 423 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 KLK14Q9P0G3 267 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 AKAP7Q9P0M2 348 aaPredicted RBP3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 KLF15Q9UIH9 416 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SALL4Q9UJQ4 1053 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC27A5Q9Y2P5 690 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 SNX14Q9Y5W7 946 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 ACTL7AQ9Y615 435 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 CYP46A1Q9Y6A2 500 aa3.35□□□□□ -1.87
SCARNA13-201ENST00000516672 GTF3C1Q12789 2109 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 MBD3L4A6NDZ8 208 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CCDC69A6NI79 296 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 MBD3L5A6NJ08 208 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KLRF2D3W0D1 207 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RNF223E7ERA6 249 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 hCG_1984214I3L0E3 225 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SH2B2O14492 632 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 PTGESO14684 152 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SCAMP3O14828 347 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF185O15231 689 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TRAPPC3O43617 180 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CREB3O43889 395 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 DHX16O60231 1041 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CREG1O75629 220 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 USP17L7P0C7H9 530 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 GOLGA8HP0CJ92 632 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TCF3P15923 654 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RPS6KB1P23443 525 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TDGF1P3P51864 188 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CASP6P55212 293 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 NLRP12P59046 1061 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SNRPNP63162 240 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TAP2Q03519 686 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 C1QBPQ07021 282 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KCNMA1Q12791 1236 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KCNJ12Q14500 433 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 C3AR1Q16581 482 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 HYAL4Q2M3T9 481 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KLHL22Q53GT1 634 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 C6orf52Q5T4I8 152 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SMYD5Q6GMV2 418 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 NCEH1Q6PIU2 408 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 BLOC1S2Q6QNY1 142 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ABHD15Q6UXT9 468 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 Q6ZS92 163 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RUFY3Q7L099 469 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CYB5R4Q7L1T6 521 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KIAA0907Q7Z7F0 614 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF410Q86VK4 478 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 DDX42Q86XP3 938 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SLITRK4Q8IW52 837 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC35F3Q8IY50 421 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CKAP2LQ8IYA6 745 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RASEFQ8IZ41 740 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 NRSN1Q8IZ57 195 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RFLNBQ8N5W9 214 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF713Q8N859 430 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 FANCBQ8NB91 859 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CTCFLQ8NI51 663 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 LMX1AQ8TE12 382 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SCFD1Q8WVM8 642 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 CCDC74AQ96AQ1 378 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms