RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ANAPC1Q9H1A4 1944 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 IFRD1O00458 451 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CYP26A1O43174 497 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 EDN1P05305 212 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 PDHA1P08559 390 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ABCB4P21439 1286 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CRHR1P34998 444 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 RPL34P49207 117 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 AQP4P55087 323 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 MXRA7P84157 204 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CYP24A1Q07973 514 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 P3H1Q32P28 736 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ZACNQ401N2 412 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM259Q4ZIN3 620 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 PIGGQ5H8A4 983 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TEDDM1Q5T9Z0 273 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 LLGL2Q6P1M3 1020 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ARCQ7LC44 396 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 HMGCLL1Q8TB92 370 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CHAC2Q8WUX2 184 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SCLYQ96I15 445 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CHORDC1Q9UHD1 332 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SCOCQ9UIL1 159 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SCN8AQ9UQD0 1980 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 SERPINB7O75635 380 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 DGKIO75912 1065 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TPPPO94811 219 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ETS1P14921 441 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 KCNE1P15382 129 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ITGAXP20702 1163 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TNFAIP3P21580 790 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 RPL9P32969 192 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 GNALP38405 381 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 DPP6P42658 865 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM62Q0P6H9 643 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 RFTN1Q14699 578 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 SLC15A3Q8IY34 581 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 FIBCD1Q8N539 461 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 CLP1Q92989 425 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 FEM1CQ96JP0 617 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 PAFAH2Q99487 392 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 KLC2Q9H0B6 622 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 AGO3Q9H9G7 860 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 UBE2TQ9NPD8 197 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TAGLN3Q9UI15 199 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 MTUS1Q9ULD2 1270 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TDRD15B5MCY1 1934 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 TARM1B6A8C7 271 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 KRT4P19013 534 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 VAMP1P23763 118 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ITGB8P26012 769 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 DNA2P51530 1060 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ERVK-21P61565 698 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 SLC10A2Q12908 348 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 BBS12Q6ZW61 710 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 DEFB128Q7Z7B8 93 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 CHPFQ8IZ52 775 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 NELL1Q92832 810 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 MAELQ96JY0 434 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF641Q96N77 438 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 OLFM3Q96PB7 478 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 BTBD2Q9BX70 525 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 C12orf65Q9H3J6 166 aaKnown RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 RSAD1Q9HA92 442 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-205ENST00000514271 PCDHB2Q9Y5E7 798 aa7.6□□□□□ -1.19
CLIP1-205ENST00000514271 ZBBXA8MT70 800 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SLC22A2O15244 555 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 TMCC1O94876 653 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SBK3P0C264 359 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 ZSCAN5DPP0CG00 497 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 ATF2P15336 505 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SYN1P17600 705 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 ARF4P18085 180 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SERPINB8P50452 374 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 C16orf59Q7L2K0 433 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 CCDC105Q8IYK2 499 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 RCOR2Q8IZ40 523 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SLCO4A1Q96BD0 722 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 C9orf72Q96LT7 481 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 PCDH18Q9HCL0 1135 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 CPSF2Q9P2I0 782 aaKnown RBP7.59□□□□□ -1.19
CLIP1-205ENST00000514271 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-205ENST00000514271 C2orf71A6NGG8 1288 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 H0Y858 1186 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SLC16A4O15374 487 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 THAP12O43422 761 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 EXTL3O43909 919 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SPAG7O75391 227 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SULT1C4O75897 302 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 GCNT3O95395 438 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 HOXA11P31270 313 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-205ENST00000514271 USP46P62068 366 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 PPARDQ03181 441 aa7.59□□□□□ -1.19
CLIP1-205ENST00000514271 SHHQ15465 462 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms