RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GMEB2Q9UKD1 530 aa10□□□□□ -0.81
RNF4-221ENST00000513643 RAB23Q9ULC3 237 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ERVW-1Q9UQF0 538 aa10□□□□□ -0.81
RNF4-221ENST00000513643 INVSQ9Y283 1065 aa10□□□□□ -0.81
RNF4-221ENST00000513643 BZW2Q9Y6E2 419 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 KNL1Q8NG31 2342 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SPTBN2O15020 2390 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 CXorf51AA0A1B0GTR3 108 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 TARSL2A2RTX5 802 aaKnown RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM72CH0Y354 149 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 AP5Z1O43299 807 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 CCP110O43303 1012 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ATP9BO43861 1147 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 RTN2O75298 545 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZMPSTE24O75844 475 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 FTLP02792 175 aaPredicted RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 SERPING1P05155 500 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 EPHX1P07099 455 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 HLA-EP13747 358 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 GPD1P21695 349 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZBTB16Q05516 673 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SULT2A1Q06520 285 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SEMA3BQ13214 749 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZNF177Q13360 481 aaPredicted RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 STARD3Q14849 445 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM72AQ5TYM5 149 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM72DQ6L9T8 149 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SARM1Q6SZW1 724 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SERPINA13PQ6UXR4 307 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ZNF783Q6ZMS7 281 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 CYP4V2Q6ZWL3 525 aaPredicted RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM72BQ86X60 149 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 DNAAF5Q86Y56 855 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 DNAJC7Q99615 494 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 SIK2Q9H0K1 926 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 RSPH9Q9H1X1 276 aaPredicted RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 PRDM16Q9HAZ2 1276 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 PARVAQ9NVD7 372 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 DLL3Q9NYJ7 618 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ARHGAP20Q9P2F6 1191 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 NCDNQ9UBB6 729 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 OR12D3Q9UGF7 316 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
RNF4-221ENST00000513643 CACNA1EQ15878 2313 aa9.99□□□□□ -0.81
RNF4-221ENST00000513643 ILVBLA1L0T0 632 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 TTC34A8MYJ7 566 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 SYNCRIPO60506 623 aaKnown RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 FOXD2O60548 495 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 MOCS3O95396 460 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 CD160O95971 181 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 PLEKP08567 350 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 CASP14P31944 242 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 L1CAMP32004 1257 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 PTGER3P43115 390 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 TPMTP51580 245 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 AIF1P55008 147 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 RPS14P62263 151 aaKnown RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 TBX2Q13207 712 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 ELF2Q15723 593 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 FNDC3BQ53EP0 1204 aaKnown RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 SLC36A4Q6YBV0 504 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 SLC41A1Q8IVJ1 513 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 VSTM4Q8IW00 320 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 KIAA2013Q8IYS2 634 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 CCDC185Q8N715 623 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 CADM4Q8NFZ8 388 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 VOPP1Q96AW1 172 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 SIPA1Q96FS4 1042 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 PPP1R9BQ96SB3 815 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 ACE2Q9BYF1 805 aaPredicted RBP9.98□□□□□ -0.81
RNF4-221ENST00000513643 ARRDC1-AS1Q9H2J1 176 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 MTG2Q9H4K7 406 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 TMEM74BQ9NUR3 256 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 BCCIPQ9P287 314 aaKnown RBP eCLIP9.98□□□□□ -0.81
RNF4-221ENST00000513643 ADAMTS1Q9UHI8 967 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 FZD10Q9ULW2 581 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.98□□□□□ -0.81
RNF4-221ENST00000513643 NCOR2Q9Y618 2525 aa9.98□□□□□ -0.81
RNF4-221ENST00000513643 DOCK4Q8N1I0 1966 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 A0A087X0T9 212 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 A0A0D9SEW6 157 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 WASH4PA8MWX3 477 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 PRR5-ARHGAP8B1AHC4 643 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 TM4SF5O14894 197 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 SIN3BO75182 1162 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms