RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MIB1Q86YT6 1006 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 AKR7LQ8NHP1 331 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 NFKBIDQ8NI38 313 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARL5BQ96KC2 179 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SAMD8Q96LT4 415 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 CAMK1GQ96NX5 476 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 NUDCD1Q96RS6 583 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 TRIM54Q9BYV2 358 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 C8orf33Q9H7E9 229 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ETAA1Q9NY74 926 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLCO3A1Q9UIG8 710 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SUFUQ9UMX1 484 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 MYO3BQ8WXR4 1341 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 A2ML1A8K2U0 1454 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRM8O00222 908 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CACNG3O60359 315 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 AKAP3O75969 853 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 APOL3O95236 402 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 DLATP10515 647 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANXA8P13928 327 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 TYRP14679 529 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 AHCYP23526 432 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRK3P35626 688 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CSNK2BP67870 215 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 LACTBP83111 547 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CEBPZQ03701 1054 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRSF1Q12849 480 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM115Q12893 351 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SNTB1Q13884 538 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 IQCB1Q15051 598 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARHGAP44Q17R89 818 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 HYAL4Q2M3T9 481 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLEKHS1Q5SXH7 462 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANXA8L1Q5VT79 327 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 KCTD9Q7L273 389 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 LAPTM4BQ86VI4 370 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 AMZ2Q86W34 360 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRAMD2AQ8IUY3 354 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDC26Q8NHZ8 85 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SETD6Q8TBK2 473 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SH3RF2Q8TEC5 729 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FBXO32Q969P5 355 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM162AQ96A26 154 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLEKHG4BQ96PX9 1271 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 TESK2Q96S53 571 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SEMA3CQ99985 751 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 MAGEB5Q9BZ81 275 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLEKHA2Q9HB19 425 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PARVGQ9HBI0 331 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 IL1RAPL2Q9NP60 686 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SEMA4BQ9NPR2 832 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 POLE3Q9NRF9 147 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM212BQ9NTI7 297 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SRRDQ9UH36 339 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SOX13Q9UN79 622 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 STX8Q9UNK0 236 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 RCE1Q9Y256 329 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FER1L4A9Z1Z3 1794 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 TNRQ92752 1358 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADGRB1O14514 1584 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM237BA0A1B0GVD1 139 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM47DPA6NHR8 397 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PRPF4O43172 522 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 MED7O43513 233 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 BUB1O43683 1085 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 NPHS1O60500 1241 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 LIPFP07098 398 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PRKCAP17252 672 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 EGR1P18146 543 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SREBF1P36956 1147 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 HTR2BP41595 481 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDR1P51861 262 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PRRX1P54821 245 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDH8P55286 799 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 PRAMEP78395 509 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 GFPT1Q06210 699 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SF3A3Q12874 501 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CTBP1Q13363 440 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 THOC5Q13769 683 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCINQ13939 588 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 BOP1Q14137 746 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 USP10Q14694 798 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 MAN2A1Q16706 1144 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 DOK7Q18PE1 504 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 FUT11Q495W5 492 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 GNASQ5JWF2 1037 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 TAF8Q7Z7C8 310 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 RBM12BQ8IXT5 1001 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 POMGNT2Q8NAT1 580 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 IP6K1Q92551 441 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARHGAP45Q92619 1136 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 RBM17Q96I25 401 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZFYVE21Q9BQ24 234 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 WDR11Q9BZH6 1224 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 LACRTQ9GZZ8 138 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 RAB33BQ9H082 229 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms