RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 RPL9P32969 192 aaKnown RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CSE1LP55060 971 aaKnown RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ACTR3P61158 418 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 RPL10AP62906 217 aaKnown RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ARHGAP8P85298 464 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 RCN1Q15293 331 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CCDC6Q16204 474 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 C6orf163Q5TEZ5 329 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 PM20D1Q6GTS8 502 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 BEND5Q7L4P6 421 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CLEC14AQ86T13 490 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 C10orf107Q8IVU9 208 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 SCUBE1Q8IWY4 988 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ZMIZ2Q8NF64 920 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 OR52K1Q8NGK4 314 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 PCED1BQ96HM7 432 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 TEKT5Q96M29 485 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 SORT1Q99523 831 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 EBF4Q9BQW3 602 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 IL22Q9GZX6 179 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 AP5M1Q9H0R1 490 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ANLNQ9NQW6 1124 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 SNX15Q9NRS6 342 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 COX16Q9P0S2 106 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CORO1CQ9ULV4 474 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ZNF195O14628 629 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TIMM44O43615 452 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TBX10O75333 385 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 H2AFYO75367 372 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 IGHA2P01877 340 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 THP07101 528 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 RALBP11234 206 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 NCAM1P13591 858 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 CYP2C18P33260 490 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 CD68P34810 354 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 CPOXP36551 454 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 CSRP3P50461 194 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ALDH18A1P54886 795 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ABCE1P61221 599 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 METTL21CQ5VZV1 264 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 BSPRYQ5W0U4 402 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 FSTL4Q6MZW2 842 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 DCLRE1AQ6PJP8 1040 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 BHLHA9Q7RTU4 235 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TP53INP2Q8IXH6 220 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 LMNTD2Q8IXW0 634 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZSCAN18Q8TBC5 510 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 SMARCD1Q96GM5 515 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 EPAS1Q99814 870 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 SYT17Q9BSW7 474 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TRIM62Q9BVG3 475 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 DDIT4Q9NX09 232 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 NSMCE4AQ9NXX6 385 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 SLC17A6Q9P2U8 582 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PCDHB12Q9Y5F1 795 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 COL4A4P53420 1690 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 MYBPHLA2RUH7 354 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 A6NHS1 94 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TMEM114B3SHH9 223 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 F5H423 210 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 CIB2O75838 187 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 SMNDC1O75940 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 KRT36O76013 467 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 MYL3P08590 195 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PAX3P23760 479 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PCSK1P29120 753 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ABL2P42684 1182 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 IDH3AP50213 366 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 IRX4P78413 519 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 MRPS35P82673 323 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 KDSRQ06136 332 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PPM1JQ5JR12 505 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 STRA8Q7Z7C7 330 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 LINC00523Q86TU6 105 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ULK2Q8IYT8 1036 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 NPWQ8N729 165 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 STON2Q8WXE9 905 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 FAM161BQ96MY7 647 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 TSGA13Q96PP4 275 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 KCNK16Q96T55 309 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 MLPHQ9BV36 600 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-210ENST00000512332 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 ZNF408Q9H9D4 720 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 GPAMQ9HCL2 828 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
CPNE4-210ENST00000512332 PIH1D1Q9NWS0 290 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms