RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.77
COPS4-211ENST00000511891 PIGVQ9NUD9 493 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.21□□□□□ -0.77
COPS4-211ENST00000511891 SERGEFQ9UGK8 458 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 SUSD2Q9UGT4 822 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 VANGL2Q9ULK5 521 aa10.21□□□□□ -0.77
COPS4-211ENST00000511891 A0A1B0GTW7 788 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 A0A1B0GVM2 712 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SPAARA0A1B0GVQ0 90 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 A0A1W2PP55 124 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 TCAF2A6NFQ2 919 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 MID1O15344 667 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 BCAT2O15382 392 aaPredicted RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 OPHN1O60890 802 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 FSBPO95073 299 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SEMA4FO95754 770 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 TOP3BO95985 862 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 SRPRAP08240 638 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 SYPP08247 313 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 CEACAM1P13688 526 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 CD59P13987 128 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SPINK2P20155 84 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 FLT3P36888 993 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 MATKP42679 507 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 GABRB2P47870 512 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 PSMD8P48556 350 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 COPB1P53618 953 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 POLR2FP61218 127 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 FAM193AP78312 1265 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 BNC1Q01954 994 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 FOXC1Q12948 553 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SEMA3BQ13214 749 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 RABGAP1LQ5R372 815 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 RNF219Q5W0B1 726 aaPredicted RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 SMYD5Q6GMV2 418 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SASS6Q6UVJ0 657 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 LAYNQ6UX15 382 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 THSD4Q6ZMP0 1018 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 PHLDB2Q86SQ0 1253 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 PIP4P1Q86T03 277 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 MMAAQ8IVH4 418 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 C18orf8Q96DM3 657 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 BTBD1Q9H0C5 482 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 TKTL2Q9H0I9 626 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 PABPC3Q9H361 631 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 FBRSQ9HAH7 460 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 IL21RQ9HBE5 538 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 NOCTQ9UK39 431 aaKnown RBP10.2□□□□□ -0.78
COPS4-211ENST00000511891 ANGPTL2Q9UKU9 493 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 SIK3Q9Y2K2 1263 aa10.2□□□□□ -0.78
COPS4-211ENST00000511891 ITIH6Q6UXX5 1313 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 EDDM13A0A1B0GTR0 161 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 A0A1B0GVT2 93 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 FAM47DPA6NHR8 397 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 GJB3O75712 270 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 CNTN5O94779 1100 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 CHRNB2P17787 502 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 SOX5P35711 763 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 CSNK1EP49674 416 aaKnown RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 CXCR3P49682 368 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 METAP1P53582 386 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 JAM2P57087 298 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 NOMO3P69849 1222 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 FMO1Q01740 532 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ZBTB16Q05516 673 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ZNF177Q13360 481 aaPredicted RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 SYCP1Q15431 976 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 CST6Q15828 149 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 STX1AQ16623 288 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 TTC31Q49AM3 519 aaPredicted RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 RAB6CQ53S08 254 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ALFQ53S48 1182 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 TTC39BQ5VTQ0 682 aaPredicted RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 ZDHHC17Q8IUH5 632 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ZNF683Q8IZ20 524 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 EMC1Q8N766 993 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 KDM1BQ8NB78 822 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 SLC30A5Q8TAD4 765 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 PTPRN2Q92932 1015 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 NT5C3BQ969T7 300 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 BIRC7Q96CA5 298 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ALG14Q96F25 216 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 CAMK1GQ96NX5 476 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 FAM129BQ96TA1 746 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 RAB6CQ9H0N0 254 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 NEUROG2Q9H2A3 272 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 SLC32A1Q9H598 525 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 WDCPQ9H6R7 721 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 DNAAF2Q9NVR5 837 aaKnown RBP10.19□□□□□ -0.78
COPS4-211ENST00000511891 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 FBXL12Q9NXK8 326 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 ARHGEF38Q9NXL2 777 aa10.19□□□□□ -0.78
COPS4-211ENST00000511891 TMEM59LQ9UK28 342 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms