RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 SEMA3BQ13214 749 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 NME3Q13232 169 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 OR52K2Q8NGK3 314 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 FEM1AQ9BSK4 669 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 MTG2Q9H4K7 406 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 WDCPQ9H6R7 721 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
CLDND1-223ENST00000511081 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 SIN3BO75182 1162 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 CLDN11O75508 207 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 GJB3O75712 270 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 PYGBP11216 843 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 CEACAM1P13688 526 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 MAOBP27338 520 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ACSL1P33121 698 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 IRAK1P51617 712 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 CDH4P55283 916 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 RNASE9P60153 205 aaKnown RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 PIP4P1Q86T03 277 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 RPRD1AQ96P16 312 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 HAPLN3Q96S86 360 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 TBCBQ99426 244 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ADAMTS1Q9UHI8 967 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ATXN2Q99700 1313 aaKnown RBP12.5□□□□□ -0.41
CLDND1-223ENST00000511081 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
CLDND1-223ENST00000511081 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 EDDM13A0A1B0GTR0 161 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 A0A1B0GTW7 788 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 TTC34A8MYJ7 566 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 ATP9BO43861 1147 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CNTN5O94779 1100 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 DNTTP04053 509 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CFIP05156 583 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SYPP08247 313 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 ATP1A3P13637 1013 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 GNSP15586 552 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 PDGFRAP16234 1089 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CDK11BP21127 795 aaKnown RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SULT1E1P49888 294 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 UBXN1Q04323 297 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 RPL10LQ96L21 214 aaKnown RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 ZDHHC5Q9C0B5 715 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 PABPC3Q9H361 631 aaKnown RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
CLDND1-223ENST00000511081 SPEGQ15772 3267 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 GOLGA8SH3BPF8 625 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 SNPHO15079 494 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 TEX33O43247 280 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 CD59P13987 128 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 PMLP29590 882 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 SHC2P98077 582 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 CENPCQ03188 943 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
CLDND1-223ENST00000511081 SLC14A1Q13336 389 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 CST6Q15828 149 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 CLEC16AQ2KHT3 1053 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
CLDND1-223ENST00000511081 SETD3Q86TU7 594 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms