RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 IGHV1OR15-9A0A0B4J2B8 117 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 RTN2O75298 545 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 MT-CO1P00395 513 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 SERPING1P05155 500 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 GZMAP12544 262 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 CNR2P34972 360 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 ZNF143P52747 638 aaPredicted RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 CAMK2GQ13555 558 aaPredicted RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 RABGAP1LQ5R372 815 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 LAIR1Q6GTX8 287 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 TCEAL6Q6IPX3 200 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 SDE2Q6IQ49 451 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 SCYL2Q6P3W7 929 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 CYP4V2Q6ZWL3 525 aaPredicted RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 STRADAQ7RTN6 431 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 OR7D4Q8NG98 312 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 RUBCNQ92622 972 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 SYN2Q92777 582 aaPredicted RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
SNF8-206ENST00000509989 C1orf74Q96LT6 269 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 CHP1Q99653 195 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 PACSIN1Q9BY11 444 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 THAP2Q9H0W7 228 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 RXFP3Q9NSD7 469 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 TBC1D30Q9Y2I9 924 aa13.96□□□□□ -0.17
SNF8-206ENST00000509989 LAMA1P25391 3075 aa13.96□□□□□ -0.18
SNF8-206ENST00000509989 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 TYW5A2RUC4 315 aaKnown RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 TMEM191CA6NGB0 347 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 K7ERQ8 282 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 TIMM44O43615 452 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 SIN3BO75182 1162 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 ALDH1A2O94788 518 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 PTGER3P43115 390 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 METAP1P53582 386 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 CDH4P55283 916 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 TBX2Q13207 712 aaPredicted RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 ASTE1Q2TB18 679 aaPredicted RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 USP39Q53GS9 565 aaKnown RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 SPECC1LQ69YQ0 1117 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 DCUN1D2Q6PH85 259 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 TMC6Q7Z403 805 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 TMPRSS6Q8IU80 811 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 NETO2Q8NC67 525 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 OR12D3Q9UGF7 316 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 FZD10Q9ULW2 581 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.95□□□□□ -0.18
SNF8-206ENST00000509989 PLXNA2O75051 1894 aa13.95□□□□□ -0.18
SNF8-206ENST00000509989 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
SNF8-206ENST00000509989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.94□□□□□ -0.18
SNF8-206ENST00000509989 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PLK4O00444 970 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 LRIG2O94898 1065 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 EPN2O95208 641 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 RHOCP08134 193 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 HNRNPH3P31942 346 aaKnown RBP13.94□□□□□ -0.18
SNF8-206ENST00000509989 ACVRL1P37023 503 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PLK1P53350 603 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 RPS14P62263 151 aaKnown RBP13.94□□□□□ -0.18
SNF8-206ENST00000509989 ECT2LQ008S8 904 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 ZNF177Q13360 481 aaPredicted RBP13.94□□□□□ -0.18
SNF8-206ENST00000509989 C9orf64Q5T6V5 341 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 TXNRD3NBQ6F5E7 133 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 LINGO4Q6UY18 593 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 FAM124AQ86V42 546 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 NLRP14Q86W24 1093 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 VCPIP1Q96JH7 1222 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 DNAJC7Q99615 494 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 CNPY3Q9BT09 278 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PRDM16Q9HAZ2 1276 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 SERGEFQ9UGK8 458 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 PLA2G4CQ9UP65 541 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNF8-206ENST00000509989 SLCO1B1Q9Y6L6 691 aa13.94□□□□□ -0.18
SNF8-206ENST00000509989 CBFA2T2O43439 604 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SMAD6O43541 496 aaKnown RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 GDF9O60383 454 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SYNCRIPO60506 623 aaKnown RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 CLDN11O75508 207 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 ATP5BP06576 529 aaKnown RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 RETP07949 1114 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 PSMA2P25787 234 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 DHPSP49366 369 aaPredicted RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 TPMTP51580 245 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 GALCP54803 685 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms