RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SYN2Q92777 582 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 EFHD2Q96C19 240 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 OPTNQ96CV9 577 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SUCLG2Q96I99 432 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZSCAN31Q96LW9 406 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 RIPOR3Q96MK2 946 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PPP1R10Q96QC0 940 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 FERD3LQ96RJ6 166 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SPATA5L1Q9BVQ7 753 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CDK19Q9BWU1 502 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM120AQ9BXJ8 343 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 NFKBIZQ9BYH8 718 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 LSG1Q9H089 658 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SMOC1Q9H4F8 434 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 AZI2Q9H6S1 392 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 C12orf10Q9HB07 376 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 KCNK13Q9HB14 408 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 NTN4Q9HB63 628 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 NMRK2Q9NPI5 230 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ATAD3AQ9NVI7 634 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 UCKL1Q9NWZ5 548 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 MIS18AQ9NYP9 233 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 OR6C2Q9NZP2 312 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 UBA2Q9UBT2 640 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 DPP7Q9UHL4 492 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SLC13A4Q9UKG4 626 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 RCOR1Q9UKL0 485 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PCDHB6Q9Y5E3 794 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CAPN7Q9Y6W3 813 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 EIF2AK4Q9P2K8 1649 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CDK13Q14004 1512 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CCDC171Q6TFL3 1326 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PLEKHH2Q8IVE3 1493 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 C15orf38-AP3S2A0A0A6YYH1 394 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 A0A1W2PPL8 197 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 NCF1BA6NI72 391 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 NCF1CA8MVU1 366 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 KIF28PB7ZC32 967 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 UBE2CO00762 179 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 WDR46O15213 610 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 GUCY1B2O75343 617 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CRTAPO75718 401 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PGM3O95394 542 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 IFNB1P01574 187 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 LTFP02788 710 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 GALTP07902 379 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 QDPRP09417 244 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 FAM153BP0C7A2 387 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 POU2F1P14859 743 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PORP16435 677 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CTRB1P17538 263 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ABCB4P21439 1286 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 EEF1DP29692 281 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CCR1P32246 355 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 LSP1P33241 339 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 KRT2P35908 639 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ADCY8P40145 1251 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 IARSP41252 1262 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TUBP50607 506 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 STAT5BP51692 787 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CASP5P51878 434 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 NR1H2P55055 460 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 RNASE9P60153 205 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ASIC1P78348 528 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 IFI35P80217 286 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ABATP80404 500 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ARHGAP8P85298 464 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 GFPT1Q06210 699 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CUL3Q13618 768 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 E2F2Q14209 437 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 LASP1Q14847 261 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 AANATQ16613 207 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 MDH1BQ5I0G3 518 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 HABP4Q5JVS0 413 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 C1orf141Q5JVX7 400 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 IFIT1BQ5T764 474 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 C1orf185Q5T7R7 199 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CTRB2Q6GPI1 263 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ERICH5Q6P6B1 374 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 DCLRE1AQ6PJP8 1040 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CCDC121Q6ZUS5 278 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PTCHD4Q6ZW05 846 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 USP30Q70CQ3 517 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 USP50Q70EL3 339 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 UNC13DQ70J99 1090 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 SRGAP1Q7Z6B7 1085 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 LRRTM4Q86VH4 590 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 VPS36Q86VN1 386 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM200AQ86VY9 491 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 FAM178BQ8IXR5 827 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 MAB21L3Q8N8X9 362 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 RBBP8NLQ8NC74 664 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CALML6Q8TD86 181 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TSPEARQ8WU66 669 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TRAPPC12Q8WVT3 735 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 DYDC1Q8WWB3 177 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 KIAA1191Q96A73 305 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 SLC22A18Q96BI1 424 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF669Q96BR6 464 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms