RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 KLHDC7AQ5VTJ3 777 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 NOP9Q86U38 636 aaKnown RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 SLCO6A1Q86UG4 719 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 CHSY1Q86X52 802 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 SKA1Q96BD8 255 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 ORAI3Q9BRQ5 295 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 RAB6CQ9H0N0 254 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 GANQ9H2C0 597 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 SLCO3A1Q9UIG8 710 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 SCML1Q9UN30 329 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 NCKAP1Q9Y2A7 1128 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 CAPN9O14815 690 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 DAB1O75553 588 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 DKK1O94907 266 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 MOCS3O95396 460 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 ASLP04424 464 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 GRK6P43250 576 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 CSNK1EP49674 416 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 CCT8P50990 548 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 METAP1P53582 386 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 RAPGEF1Q13905 1077 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 KIF19Q2TAC6 998 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 C9orf64Q5T6V5 341 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 TAF3Q5VWG9 929 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 OR6B2Q6IFH4 312 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 FBXL22Q6P050 247 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 LAYNQ6UX15 382 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 DBX2Q6ZNG2 339 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 RBM43Q6ZSC3 357 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 TMPRSS7Q7RTY8 843 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 DHX40Q8IX18 779 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 GALNT15Q8N3T1 639 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 SLC20A1Q8WUM9 679 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 ALG14Q96F25 216 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 RPL10LQ96L21 214 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 SGK2Q9HBY8 427 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 TM9SF3Q9HD45 589 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 DDIT4Q9NX09 232 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 ERVW-1Q9UQF0 538 aa11.26□□□□□ -0.61
RNF4-212ENST00000509258 SMG1Q96Q15 3661 aaKnown RBP11.26□□□□□ -0.61
RNF4-212ENST00000509258 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 C10orf142B7Z368 130 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 PLK4O00444 970 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 HSF2BPO75031 334 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CNTN5O94779 1100 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 ADCY5O95622 1261 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 APOEP02649 317 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 MMEP08473 750 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 UCHL3P15374 230 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CYP11B1P15538 503 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 PDGFRAP16234 1089 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CHRNB2P17787 502 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CD27P26842 260 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CDH5P33151 784 aaPredicted RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 SLC6A3Q01959 620 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 PTK2Q05397 1052 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 NME3Q13232 169 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 KRT31Q15323 416 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 KCNT1Q5JUK3 1230 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 SLC26A9Q7LBE3 791 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 ADAT2Q7Z6V5 191 aaKnown RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 ZNF683Q8IZ20 524 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 CCAR2Q8N163 923 aaKnown RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 MDM1Q8TC05 714 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 BIRC7Q96CA5 298 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 BTN2A3PQ96KV6 586 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 FAM129BQ96TA1 746 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 NPY6RQ99463 290 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 RSPH9Q9H1X1 276 aaPredicted RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 VPS16Q9H269 839 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 PIGVQ9NUD9 493 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 ASNSD1Q9NWL6 643 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 DKK4Q9UBT3 224 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 TPX2Q9ULW0 747 aaKnown RBP11.25□□□□□ -0.61
RNF4-212ENST00000509258 ANKRD6Q9Y2G4 727 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 SNX11Q9Y5W9 270 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 HS3ST4Q9Y661 456 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
RNF4-212ENST00000509258 F8VZ95 297 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 RNF103O00237 685 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 MID1O15344 667 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 TNFSF14O43557 240 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 PCDHGA12O60330 932 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 DFNA5O60443 496 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms