RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ORC3Q9UBD5 711 aaPredicted RBP2.65□□□□□ -1.99
DEPDC1B-204ENST00000509006 CFDP1Q9UEE9 299 aaPredicted RBP2.65□□□□□ -1.99
DEPDC1B-204ENST00000509006 MID2Q9UJV3 735 aa2.65□□□□□ -1.99
DEPDC1B-204ENST00000509006 CAPN11Q9UMQ6 739 aa2.65□□□□□ -1.99
DEPDC1B-204ENST00000509006 PCDHGB2Q9Y5G2 931 aa2.65□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A087WYN8 130 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A087X0M5 115 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMEM272A0A1B0GTI8 110 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A1B0GX30 115 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A1W2PPC1 479 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 FSD2A1L4K1 749 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 A6NCN8 305 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 AQP7P3A6NL99 342 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SYT5O00445 386 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SPTLC2O15270 562 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 HOXC11O43248 304 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PLA2G6O60733 806 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 TIPRLO75663 272 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CD4P01730 458 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 TXNP10599 105 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 TSHRP16473 764 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 BTF3P20290 206 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CHMP24386 653 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 EEF1GP26641 437 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARRB2P32121 409 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRT20P35900 424 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ALDH7A1P49419 539 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PGGT1BP53609 377 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 EIF4A1P60842 406 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARF3P61204 181 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 WDR5P61964 334 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 RPS16P62249 146 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARF1P84077 181 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PLIN5Q00G26 463 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CCDC15Q0P6D6 951 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SPARCL1Q14515 664 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC29A2Q14542 456 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 INPP5JQ15735 1006 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PFKFB4Q16877 469 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PRTGQ2VWP7 1150 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 TUBB8Q3ZCM7 444 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 C3orf38Q5JPI3 329 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 C9orf50Q5SZB4 431 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 MANEALQ5VSG8 457 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 NAA35Q5VZE5 725 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARL6IP4Q66PJ3 421 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZNF324BQ6AW86 544 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CLEC9AQ6UXN8 241 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 RBM44Q6ZP01 1051 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 NEK10Q6ZWH5 1172 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZNF329Q86UD4 541 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZSCAN30Q86W11 494 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CREBRFQ8IUR6 639 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 RPAP2Q8IXW5 612 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 NKAIN3Q8N8D7 197 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 FAM71DQ8N9W8 422 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ATG16L2Q8NAA4 619 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ATP11CQ8NB49 1132 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 CENPIQ92674 756 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 VPS50Q96JG6 964 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 MSLNLQ96KJ4 702 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 FAM84BQ96KN1 310 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 HIST1H2AAQ96QV6 131 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SDF4Q9BRK5 362 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 MAGEH1Q9H213 219 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 ALDH8A1Q9H2A2 487 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 PDCL3Q9H2J4 239 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SAP30LQ9HAJ7 183 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SEPSECSQ9HD40 501 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SH3GLB2Q9NR46 395 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SACM1LQ9NTJ5 587 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 IFT80Q9P2H3 777 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 AFF4Q9UHB7 1163 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC39A10Q9ULF5 831 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 COG5Q9UP83 839 aa2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 RRP7AQ9Y3A4 280 aaKnown RBP2.64□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A1W2PPC4 97 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SYNDIG1LA6NDD5 238 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 A6NLC8 198 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 F8W810 466 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 RAB27BO00194 218 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 NTN3O00634 580 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 GRID2O43424 1007 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 NCK2O43639 380 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 INMTO95050 263 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC3A2P08195 630 aaKnown RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMIGD3P0DMS9 266 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 HARSP12081 509 aaKnown RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 MYL4P12829 197 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 ALOX12P18054 663 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SP100P23497 879 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 RBL1P28749 1068 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 HOXD12P35452 270 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 POLD2P49005 469 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC12A2P55011 1212 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRT83P78385 493 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 RAE1P78406 368 aaKnown RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 PMS2P11Q13670 270 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 KCNAB1Q14722 419 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 POSTNQ15063 836 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms