RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SND1Q7KZF4 910 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLDND1-220ENST00000508902 TFAP2DQ7Z6R9 452 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 NTAN1Q96AB6 310 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 ZNF653Q96CK0 615 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 ARHGEF26Q96DR7 871 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 RPL10LQ96L21 214 aaKnown RBP18.7■□□□□ 0.58
CLDND1-220ENST00000508902 CNPY3Q9BT09 278 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 CNOT8Q9UFF9 292 aaKnown RBP18.7■□□□□ 0.58
CLDND1-220ENST00000508902 ERVW-1Q9UQF0 538 aa18.7■□□□□ 0.58
CLDND1-220ENST00000508902 A0A0D9SEW6 157 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 CBFA2T2O43439 604 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 SNAP91O60641 907 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 CLDN11O75508 207 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 EPN2O95208 641 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 GLDCP23378 1020 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 PI4KAP42356 2102 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 SCAPQ12770 1279 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 SEMA3BQ13214 749 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 CCDC6Q16204 474 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.69■□□□□ 0.58
CLDND1-220ENST00000508902 NLRP14Q86W24 1093 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 FEM1AQ9BSK4 669 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 THAP2Q9H0W7 228 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 OSBPL2Q9H1P3 480 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 SMOC1Q9H4F8 434 aa18.69■□□□□ 0.58
CLDND1-220ENST00000508902 USP36Q9P275 1121 aaKnown RBP18.69■□□□□ 0.58
CLDND1-220ENST00000508902 SRGAP2O75044 1071 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 MFAP3LO75121 409 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 SIN3BO75182 1162 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 LRIG2O94898 1065 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 RETP07949 1114 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 TCF4P15884 667 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 EIF4A3P38919 411 aaKnown RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 ADKP55263 362 aaKnown RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 MTA1Q13330 715 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 CA9Q16790 459 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 USP39Q53GS9 565 aaKnown RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 RNF219Q5W0B1 726 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 KIAA1324Q6UXG2 1013 aaKnown RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 TMC6Q7Z403 805 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 CPNE8Q86YQ8 564 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 PGBD3Q8N328 593 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 ZNF557Q8N988 423 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 OR7D4Q8NG98 312 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 FRS2Q8WU20 508 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 CHP1Q99653 195 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 PACSIN1Q9BY11 444 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 PARVAQ9NVD7 372 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 GPATCH2LQ9NWQ4 482 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 FZD10Q9ULW2 581 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 CYP8B1Q9UNU6 501 aa18.68■□□□□ 0.58
CLDND1-220ENST00000508902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLDND1-220ENST00000508902 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 MT-CO1P00395 513 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ASLP04424 464 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ATP5BP06576 529 aaKnown RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 PTGER3P43115 390 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ECT2LQ008S8 904 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 SPEM2Q0P670 501 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ZNF177Q13360 481 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 HNRNPA1L2Q32P51 320 aaKnown RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 C9orf64Q5T6V5 341 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 DCUN1D2Q6PH85 259 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 TMPRSS6Q8IU80 811 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 OR2T3Q8NH03 318 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 NOL6Q9H6R4 1146 aaKnown RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 MYO1AQ9UBC5 1043 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 PPARGC1AQ9UBK2 798 aaKnown RBP18.67■□□□□ 0.58
CLDND1-220ENST00000508902 OR12D3Q9UGF7 316 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 PAXBP1Q9Y5B6 917 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 ACTL7AQ9Y615 435 aa18.67■□□□□ 0.58
CLDND1-220ENST00000508902 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 ZMPSTE24O75844 475 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 RHOCP08134 193 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 PSMA2P25787 234 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 RPS14P62263 151 aaKnown RBP18.66■□□□□ 0.58
CLDND1-220ENST00000508902 GFPT1Q06210 699 aaPredicted RBP18.66■□□□□ 0.58
CLDND1-220ENST00000508902 SLC12A1Q13621 1099 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 STARD3Q14849 445 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 PLA2G2CQ5R387 149 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 SLC41A1Q8IVJ1 513 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 TMEFF1Q8IYR6 380 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 KIAA2013Q8IYS2 634 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 DEFB119Q8N690 84 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 PTPRN2Q92932 1015 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 BTBD6Q96KE9 485 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 ZYG11BQ9C0D3 744 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 ARRDC1-AS1Q9H2J1 176 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 RXFP3Q9NSD7 469 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 VPS51Q9UID3 782 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 PLA2G4CQ9UP65 541 aa18.66■□□□□ 0.58
CLDND1-220ENST00000508902 BZW2Q9Y6E2 419 aaKnown RBP18.66■□□□□ 0.58
CLDND1-220ENST00000508902 CACNA1EQ15878 2313 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms