RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	PRDM16	Q9HAZ2	1276 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	PARVA	Q9NVD7	372 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	TAS2R14	Q9NYV8	317 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	SUN2	Q9UH99	717 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	RAD54B	Q9Y620	910 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	SCIN	Q9Y6U3	715 aa		5.18	□□□□□ -1.58
SNHG4-205	ENST00000507692	IGLV3-10	A0A075B6K4	115 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TCRBV5S1A1T	A0A578	114 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692		I6L893	689 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	DDX3X	O00571	662 aa	Known RBP eCLIP	5.17	□□□□□ -1.58	4e-14	■□□□□ 10.9
SNHG4-205	ENST00000507692	DCLK1	O15075	740 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MAP3K13	O43283	966 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CCP110	O43303	1012 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SRGAP2	O75044	1071 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	LRP3	O75074	770 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	RNF8	O76064	485 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CNTN5	O94779	1100 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	RET	P07949	1114 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	RHOC	P08134	193 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PLEK	P08567	350 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	HLA-E	P13747	358 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PRKCH	P24723	683 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PSMA2	P25787	234 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MZF1	P28698	734 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	OR1E1	P30953	314 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	HNRNPH3	P31942	346 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ADRA1B	P35368	520 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	P2RY2	P41231	377 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	IRAK1	P51617	712 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PLK1	P53350	603 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	AIF1	P55008	147 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	HDAC4	P56524	1084 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	RPL7A	P62424	266 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ECT2L	Q008S8	904 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	NRG1	Q02297	640 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SCAP	Q12770	1279 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MAMLD1	Q13495	774 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CAMK2G	Q13555	558 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PTPRN	Q16849	979 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PLEKHG6	Q3KR16	790 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PLK5	Q496M5	336 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	EFHC2	Q5JST6	749 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PPP1R15B	Q5SWA1	713 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	C6orf118	Q5T5N4	469 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SH3PXD2A	Q5TCZ1	1133 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PMS2CL	Q68D20	193 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PLEKHA7	Q6IQ23	1121 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CXorf57	Q6NSI4	855 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SCYL2	Q6P3W7	929 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SARM1	Q6SZW1	724 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SLC36A4	Q6YBV0	504 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TMC6	Q7Z403	805 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SLFN11	Q7Z7L1	901 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	C14orf80	Q86SX3	495 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	KBTBD6	Q86V97	674 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TMPRSS6	Q8IU80	811 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	VSTM4	Q8IW00	320 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	DRC7	Q8IY82	874 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ZNF683	Q8IZ20	524 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	APCDD1	Q8J025	514 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	DCLK2	Q8N568	766 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	GPR161	Q8N6U8	529 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	KDM1B	Q8NB78	822 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	OR2T3	Q8NH03	318 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	OLIG1	Q8TAK6	271 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	FNIP1	Q8TF40	1166 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PRCC	Q92733	491 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	NTAN1	Q96AB6	310 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ZNF653	Q96CK0	615 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ERLEC1	Q96DZ1	483 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MRGPRX1	Q96LB2	322 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	NCAPG	Q9BPX3	1015 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	FEM1A	Q9BSK4	669 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TRIM5	Q9C035	493 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ZYG11B	Q9C0D3	744 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MUC3B	Q9H195	1237 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ISCU	Q9H1K1	167 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	OSBPL2	Q9H1P3	480 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TMEM245	Q9H330	911 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	DEF6	Q9H4E7	631 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	RETREG1	Q9H6L5	497 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CD248	Q9HCU0	757 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MRPL47	Q9HD33	250 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ANLN	Q9NQW6	1124 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TMPRSS4	Q9NRS4	437 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ZNHIT6	Q9NWK9	470 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	MPP6	Q9NZW5	540 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	CNOT8	Q9UFF9	292 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	OR12D3	Q9UGF7	316 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ADAMTS1	Q9UHI8	967 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SLC25A13	Q9UJS0	675 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	VPS28	Q9UK41	221 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	INTS6	Q9UL03	887 aa	Known RBP	5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	ERVW-1	Q9UQF0	538 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	INVS	Q9Y283	1065 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	TBC1D30	Q9Y2I9	924 aa		5.17	□□□□□ -1.58
SNHG4-205	ENST00000507692	SNX10	Q9Y5X0	201 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms