RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 COLEC11Q9BWP8 271 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
SPDL1-206ENST00000507232 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 IARS2Q9NSE4 1012 aaKnown RBP13.28□□□□□ -0.28
SPDL1-206ENST00000507232 MKS1Q9NXB0 559 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
SPDL1-206ENST00000507232 CAPN14A8MX76 684 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 HHLA1C9JL84 531 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 M0QZ92 97 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 GLRA3O75311 464 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 LRIG2O94898 1065 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 PGFP49763 221 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 HUNKP57058 714 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 ITGA9Q13797 1035 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 KRT72Q14CN4 511 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 WASHC2DQ5SRD0 308 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 BHLHA9Q7RTU4 235 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 MAVSQ7Z434 540 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.27□□□□□ -0.28
SPDL1-206ENST00000507232 SPATA22Q8NHS9 363 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 RTP3Q9BQQ7 232 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 UNKQ9C0B0 810 aaKnown RBP13.27□□□□□ -0.28
SPDL1-206ENST00000507232 WWP1Q9H0M0 922 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.28
SPDL1-206ENST00000507232 THAP1Q9NVV9 213 aa13.27□□□□□ -0.28
SPDL1-206ENST00000507232 MGEA5O60502 916 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 PROCP04070 461 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 NMBRP28336 390 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 AVPR1AP37288 418 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 THOC5Q13769 683 aaKnown RBP13.27□□□□□ -0.29
SPDL1-206ENST00000507232 CCDC6Q16204 474 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 CST9Q5W186 159 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 SLC25A41Q8N5S1 370 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPDL1-206ENST00000507232 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 C20orf96Q9NUD7 363 aaPredicted RBP13.27□□□□□ -0.29
SPDL1-206ENST00000507232 CPSF2Q9P2I0 782 aaKnown RBP13.27□□□□□ -0.29
SPDL1-206ENST00000507232 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
SPDL1-206ENST00000507232 ARHGAP42A6NI28 874 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 BIRC5O15392 142 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
SPDL1-206ENST00000507232 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
SPDL1-206ENST00000507232 B3GAT3O94766 335 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 AP2A1O95782 977 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 IL1BP01584 269 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 ITGB1P05556 798 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 GNAT1P11488 350 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 CTGFP29279 349 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 CD52P31358 61 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 GP5P40197 560 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 CCR10P46092 362 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 USP4Q13107 963 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 SEMA3BQ13214 749 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 ANKRD20A4Q4UJ75 823 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 KYAT3Q6YP21 454 aaKnown RBP13.26□□□□□ -0.29
SPDL1-206ENST00000507232 LRRTM3Q86VH5 581 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 CCDC106Q9BWC9 280 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 MAN1C1Q9NR34 630 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 SFMBT1Q9UHJ3 866 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 TRPV2Q9Y5S1 764 aa13.26□□□□□ -0.29
SPDL1-206ENST00000507232 SCN4AP35499 1836 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ZCWPW2A0A1B0GU75 182 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 PDHA1P08559 390 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 OR4Q2P0C623 313 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 CNTFP26441 200 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 GARSP41250 739 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 LHX1P48742 406 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SPANXN3Q5MJ09 141 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 NRG4Q8WWG1 115 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SORT1Q99523 831 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 TUBB6Q9BUF5 446 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 CNGB3Q9NQW8 809 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 BFARQ9NZS9 450 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 DCDC2Q9UHG0 476 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 WASF2Q9Y6W5 498 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SPECC1L-ADORA2AF8WAN1 911 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 HNRNPCL1O60812 293 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ZMPSTE24O75844 475 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SORBS2O94875 1100 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 FBXO21O94952 628 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 RALBP11234 206 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 THPOP40225 353 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SLC25A3Q00325 362 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 TRIM32Q13049 653 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 UPP1Q16831 310 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms