RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 GPATCH2LQ9NWQ4 482 aa17.47■□□□□ 0.39
SQSTM1-211ENST00000506690 AP4S1Q9Y587 144 aa17.47■□□□□ 0.39
SQSTM1-211ENST00000506690 HDAC3O15379 428 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 PDGFRAP16234 1089 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 BOLA3Q53S33 107 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 GRAMD4Q6IC98 578 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 GPR141Q7Z602 305 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 AGR3Q8TD06 166 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 ARNTL2Q8WYA1 636 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 C12orf43Q96C57 262 aaKnown RBP17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 ASB9Q96DX5 294 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 ILKAPQ9H0C8 392 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 SEMA6AQ9H2E6 1030 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 TMEM134Q9H6X4 195 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 TUBA8Q9NY65 449 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 PTPRFP10586 1907 aa17.46■□□□□ 0.39
SQSTM1-211ENST00000506690 TFPTP0C1Z6 253 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 RAP1GAPP47736 663 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 ART3Q13508 389 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 CDO1Q16878 200 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 ZBED5Q49AG3 693 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 CMC1Q7Z7K0 106 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 CLVS1Q8IUQ0 354 aaPredicted RBP17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 MYO1HQ8N1T3 1032 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 ADAMTS16Q8TE57 1224 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 ZBTB26Q9HCK0 441 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 MORF4L1Q9UBU8 362 aa17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 IPO11Q9UI26 975 aaKnown RBP17.46■□□□□ 0.38
SQSTM1-211ENST00000506690 E2F8A0AVK6 867 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 TRIM43BA6NCK2 446 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 TRIM38O00635 465 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 NEMP1O14524 444 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 MAFGO15525 162 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 TRIM13O60858 407 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 H2AFYO75367 372 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 MICAL2O94851 1124 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 VAPBO95292 243 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 COL6A2P12110 1019 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ZNF12P17014 697 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 PGAM1P18669 254 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 HMOX2P30519 316 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 GP5P40197 560 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 GPD2P43304 727 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 CCR3P51677 355 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 SLC5A3P53794 718 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 CDH15P55291 814 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ZNF829Q3KNS6 432 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 FAM156AQ8NDB6 213 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 STON2Q8WXE9 905 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 LRTOMTQ8WZ04 291 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 BORCS5Q969J3 196 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 SLC29A1Q99808 456 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 YIPF2Q9BWQ6 316 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 FUOMA2VDF0 154 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 KPNA7A9QM74 516 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 C9IYK1 514 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 PLOD2O00469 737 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 MPSTP25325 297 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 BAG6P46379 1132 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 PSMD8P48556 350 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ORC1Q13415 861 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 CA9Q16790 459 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 CNTD1Q8N815 330 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 SLC7A14Q8TBB6 771 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ZSCAN18Q8TBC5 510 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 ZNF670Q9BS34 389 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 GATA5Q9BWX5 397 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 SLC38A10Q9HBR0 1119 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 NXF1Q9UBU9 619 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 COQ6Q9Y2Z9 468 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 RAP2CQ9Y3L5 183 aa17.45■□□□□ 0.38
SQSTM1-211ENST00000506690 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 TCAF2A6NFQ2 919 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 HTRA2O43464 458 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 CHRNGP07510 517 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 TCN1P20061 433 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 GARSP41250 739 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 HK2P52789 917 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 ACTR2P61160 394 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 SP4Q02446 784 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 KCTD21Q4G0X4 260 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 SEL1L3Q68CR1 1132 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 ZPBP2Q6X784 338 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 DCDC5Q6ZRR9 648 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 DCLK2Q8N568 766 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 BCO2Q9BYV7 579 aa17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 SUCOQ9UBS9 1254 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-211ENST00000506690 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms