RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF534Q76KX8 674 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 HACE1Q8IYU2 909 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 KIAA0319LQ8IZA0 1049 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TDRD5Q8NAT2 981 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 RDH11Q8TC12 318 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TMIGD2Q96BF3 282 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TUBA1CQ9BQE3 449 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 PAIP1Q9H074 479 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 ZNF385DQ9H6B1 395 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SLC38A7Q9NVC3 462 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 GID8Q9NWU2 228 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SPATA7Q9P0W8 599 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TXNDC16Q9P2K2 825 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 RAP2CQ9Y3L5 183 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 FAM32AQ9Y421 112 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 PCDHA10Q9Y5I2 948 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 CNTNAP1P78357 1384 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SMCHD1A6NHR9 2005 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 C7orf72A4D263 438 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 GOLGA8TH3BQL2 631 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 PSMD12O00232 456 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 XPO1O14980 1071 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 MPOP05164 745 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 ICAM1P05362 532 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 INHBBP09529 407 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 CDH3P22223 829 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 DCKP27707 260 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 ZNF143P52747 638 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 MS4A2Q01362 244 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SLC9B1Q4ZJI4 515 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 BOLA3Q53S33 107 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 GRTP1Q5TC63 336 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SLC9A4Q6AI14 798 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 XRRA1Q6P2D8 792 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 XYLT1Q86Y38 959 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 PLD5Q8N7P1 536 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TRUB1Q8WWH5 349 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 MCRS1Q96EZ8 462 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 TBCBQ99426 244 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 GPATCH1Q9BRR8 931 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 COQ10BQ9H8M1 238 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SELENONQ9NZV5 590 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SEPT3Q9UH03 358 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 MYOCOSA0A1B0GUC4 107 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TMEM150BA6NC51 233 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SNAP91O60641 907 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TRIM13O60858 407 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PRKCGP05129 697 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TYK2P29597 1187 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SLC7A1P30825 629 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SERPINB5P36952 375 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ACOT2P49753 483 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TMED10P49755 219 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 BCAR1P56945 870 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TRIM25Q14258 630 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SEL1L3Q68CR1 1132 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PPP4R4Q6NUP7 873 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TMEM53Q6P2H8 277 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SLC15A3Q8IY34 581 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ZNF781Q8N8C0 355 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ANKFN1Q8N957 763 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MFSD2AQ8NA29 543 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 KLHL32Q96NJ5 620 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 CPNE1Q99829 537 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 CNPY3Q9BT09 278 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ZBTB26Q9HCK0 441 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 XPNPEP1Q9NQW7 623 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 TMEM216Q9P0N5 145 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PCSK1NQ9UHG2 260 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MAFGO15525 162 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 NOL3O60936 208 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 HSPA1AP0DMV8 641 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 HSPA1BP0DMV9 641 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PGAM1P18669 254 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 RBL1P28749 1068 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 EPHA3P29320 983 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 GP5P40197 560 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SLC5A3P53794 718 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MYL6P60660 151 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PEX6Q13608 980 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MAPRE2Q15555 327 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 ZYXQ15942 572 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 PBXIP1Q96AQ6 731 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 SH2D3AQ9BRG2 576 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
SCLT1-208ENST00000506368 YTHDF1Q9BYJ9 559 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 EIF2B3Q9NR50 452 aaKnown RBP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCLT1-208ENST00000506368 HTRA2O43464 458 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-208ENST00000506368 PRPSAP2O60256 369 aa16.21■□□□□ 0.19
SCLT1-208ENST00000506368 STAMBPO95630 424 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms