RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NFATC1O95644 943 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 PYGLP06737 847 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 RPS13P62277 151 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 ZBTB16Q05516 673 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 PGM5Q15124 567 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 EZH2Q15910 746 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 CCDC142Q17RM4 750 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 KIAA1755Q5JYT7 1200 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 CBWD5Q5RIA9 395 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 PAPD7Q5XG87 772 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 SCN4BQ8IWT1 228 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 C2CD4CQ8TF44 421 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 KAT2AQ92830 837 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 PPP1R10Q96QC0 940 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 TWNKQ96RR1 684 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 CHMP4AQ9BY43 222 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 ACAD9Q9H845 621 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 RASSF1Q9NS23 344 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 ARL15Q9NXU5 204 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 SLC8A2Q9UPR5 921 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 TCRBV7S3A2A0A539 114 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 WDR91A4D1P6 747 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 CXorf65A6NEN9 183 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 KCNJ18B7U540 433 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 E5RJQ4 531 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 SYN3O14994 580 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 NPHP1O15259 732 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 POLBP06746 335 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 CYP19A1P11511 503 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 ARSAP15289 507 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 GSTM2P28161 218 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 ID2Q02363 134 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 THOC5Q13769 683 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 ANKRD1Q15327 319 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 TRIP6Q15654 476 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 Q4G0T1 1027 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 RUNDC3AQ59EK9 446 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 KLBQ86Z14 1044 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 ANKRD44Q8N8A2 993 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 PRSS3P2Q8NHM4 247 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 HERVK_113Q902F9 699 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 STAMQ92783 540 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 CUL5Q93034 780 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 MAELQ96JY0 434 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 PIMREGQ9BSJ6 248 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 IL21RQ9HBE5 538 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 TMEM45AQ9NWC5 275 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 GGA3Q9NZ52 723 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 UTS2RQ9UKP6 389 aa4.45□□□□□ -1.7
TOPBP1-204ENST00000505804 DPPA5A6NC42 116 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 VWA3AA6NCI4 1184 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 RRN3P2A6NIE6 340 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 SAC3D1A6NKF1 404 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 OVOL3O00110 214 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 KLK10O43240 276 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 DHX16O60231 1041 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 TLR2O60603 784 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 WNT1P04628 370 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 CNPP09543 421 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 CYP4B1P13584 511 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 CIITAP33076 1130 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 CCR5P51681 352 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 RPS6KA3P51812 740 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 MVDP53602 400 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 OAZ1P54368 228 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 UBE3AQ05086 875 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 GALNT3Q14435 633 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 SEMA3AQ14563 771 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 MIDNQ504T8 468 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 HSP90AB4PQ58FF6 505 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 LRRTM4Q86VH4 590 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 MASTLQ96GX5 879 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 REEP2Q9BRK0 252 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 CTDSP1Q9GZU7 261 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 AAMDCQ9H7C9 122 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 C9orf78Q9NZ63 289 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 LAMP3Q9UQV4 416 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 BTBD3Q9Y2F9 522 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 ZNF804BA4D1E1 1349 aa4.44□□□□□ -1.7
TOPBP1-204ENST00000505804 TRBV5-3A0A0A0MS03 114 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 NCAM2O15394 837 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 MSI1O43347 362 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 ANP32CO43423 234 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 TYK2P29597 1187 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 ARHGAP8P85298 464 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 RHAGQ02094 409 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 CHRNDQ07001 517 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 DLGAP5Q15398 846 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 GXYLT1Q4G148 440 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 DENND1BQ6P3S1 775 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms