RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 AVPR2P30518 371 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 RBM5P52756 815 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD1-203ENST00000505657 RHAGQ02094 409 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 SMTNL2Q2TAL5 461 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 ZNF484Q5JVG2 852 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 PXDC1Q5TGL8 231 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 MTFR2Q6P444 385 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 SLC30A9Q6PML9 568 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 LRIG3Q6UXM1 1119 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 TMEM200AQ86VY9 491 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 VPS52Q8N1B4 723 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 FAM47BQ8NA70 645 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 AFG1LQ8WV93 481 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 KCNJ9Q92806 393 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 KTI12Q96EK9 354 aaPredicted RBP4.31□□□□□ -1.72
CHD1-203ENST00000505657 ZFYVE19Q96K21 471 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 PIGSQ96S52 555 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 CHODLQ9H9P2 273 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
CHD1-203ENST00000505657 THSD1Q9NS62 852 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 ARL15Q9NXU5 204 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 KIF17Q9P2E2 1029 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 IPO11Q9UI26 975 aaKnown RBP4.31□□□□□ -1.72
CHD1-203ENST00000505657 AGO2Q9UKV8 859 aaKnown RBP4.31□□□□□ -1.72
CHD1-203ENST00000505657 COG5Q9UP83 839 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 SLC8A2Q9UPR5 921 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 LAMP3Q9UQV4 416 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 TCRBV7S3A2A0A539 114 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 KCNJ18B7U540 433 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 RHODO00212 210 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 USP12O75317 370 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 NEURL1O76050 574 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 NFATC1O95644 943 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 NR4A2P43354 598 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 PCP4P48539 62 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 ODF3L2Q3SX64 289 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 INO80DQ53TQ3 878 aaPredicted RBP4.3□□□□□ -1.72
CHD1-203ENST00000505657 SCN4BQ8IWT1 228 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 FTSJ3Q8IY81 847 aaKnown RBP4.3□□□□□ -1.72
CHD1-203ENST00000505657 PTGR2Q8N8N7 351 aaPredicted RBP4.3□□□□□ -1.72
CHD1-203ENST00000505657 ENDOVQ8N8Q3 282 aaKnown RBP4.3□□□□□ -1.72
CHD1-203ENST00000505657 ANKRD42Q8N9B4 389 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 SPATA5Q8NB90 893 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 LINS1Q8NG48 757 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 HERPUD2Q9BSE4 406 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 ZNF304Q9HCX3 659 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 SPAG4Q9NPE6 437 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 ZBTB40Q9NUA8 1239 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 TMEM248Q9NWD8 314 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
CHD1-203ENST00000505657 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 STX16-NPEPL1H3BU86 382 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 SOCS2O14508 198 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 STX16O14662 325 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 MSI1O43347 362 aaKnown RBP4.29□□□□□ -1.72
CHD1-203ENST00000505657 HNRNPRO43390 633 aaKnown RBP4.29□□□□□ -1.72
CHD1-203ENST00000505657 ATG13O75143 517 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
CHD1-203ENST00000505657 TK1P04183 234 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 CHRNB1P11230 501 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 PKMP14618 531 aaKnown RBP4.29□□□□□ -1.72
CHD1-203ENST00000505657 RXRAP19793 462 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 TYK2P29597 1187 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 CIITAP33076 1130 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 GXYLT1Q4G148 440 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 NUGGCQ68CJ6 796 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 B4GALNT4Q76KP1 1039 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 IRF2BP2Q7Z5L9 587 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 ANKS1BQ7Z6G8 1248 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 HERC6Q8IVU3 1022 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 ARFGAP1Q8N6T3 406 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 SLC44A5Q8NCS7 719 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 TRMOQ9BU70 441 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 TUBB6Q9BUF5 446 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 FOXP1Q9H334 677 aaPredicted RBP4.29□□□□□ -1.72
CHD1-203ENST00000505657 ACAD9Q9H845 621 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 Q9N2J8 555 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 SLC25A13Q9UJS0 675 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 BAG5Q9UL15 447 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 CACNA1IQ9P0X4 2223 aa4.29□□□□□ -1.72
CHD1-203ENST00000505657 FOXO6A8MYZ6 492 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 TPD52L2O43399 206 aaKnown RBP4.28□□□□□ -1.72
CHD1-203ENST00000505657 ARSAP15289 507 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
CHD1-203ENST00000505657 ACTR2P61160 394 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 GALNT3Q14435 633 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
CHD1-203ENST00000505657 ENTPD8Q5MY95 495 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 CYB5R4Q7L1T6 521 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 KLBQ86Z14 1044 aa4.28□□□□□ -1.72
CHD1-203ENST00000505657 FSIP1Q8NA03 581 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms