RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SLC39A13Q96H72 371 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 RPL10LQ96L21 214 aaKnown RBP6.06□□□□□ -1.44
GYPB-205ENST00000505583 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
GYPB-205ENST00000505583 ACE2Q9BYF1 805 aaPredicted RBP6.06□□□□□ -1.44
GYPB-205ENST00000505583 DNAI2Q9GZS0 605 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 ACP6Q9NPH0 428 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 TJP2Q9UDY2 1190 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 ARMCX3Q9UH62 379 aaPredicted RBP6.06□□□□□ -1.44
GYPB-205ENST00000505583 SUN2Q9UH99 717 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 CYTH4Q9UIA0 394 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 KIAA1257Q9ULG3 409 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 ERVW-1Q9UQF0 538 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 PCDHB4Q9Y5E5 795 aa6.06□□□□□ -1.44
GYPB-205ENST00000505583 ACACAQ13085 2346 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 URB1O60287 2271 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 ITIH6Q6UXX5 1313 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 BHMG1C9JSJ3 638 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 RNF103O00237 685 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ENC1O14682 589 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 SLC16A3O15427 465 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 IRAK2O43187 625 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 LUC7L3O95232 432 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 MOCS2O96007 188 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 IGLV3-25P01717 112 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 PAEPP09466 180 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 BMP6P22004 513 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 TBXAS1P24557 533 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 MZF1P28698 734 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 CD38P28907 300 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 DRD3P35462 400 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 GPD2P43304 727 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 PSMD8P48556 350 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 RPL34P49207 117 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 ACADVLP49748 655 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ADPRHP54922 357 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 C21orf59P57076 290 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 FKBP3Q00688 224 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 TARDBPQ13148 414 aaKnown RBP eCLIP6.05□□□□□ -1.44
GYPB-205ENST00000505583 CDH18Q13634 790 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ARID5BQ14865 1188 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 E2F5Q15329 346 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 QPCTQ16769 361 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ZC3H12AQ5D1E8 599 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 SFMBT2Q5VUG0 894 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 RAP1GAP2Q684P5 730 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 DENND1BQ6P3S1 775 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ADAT2Q7Z6V5 191 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 UNC45BQ8IWX7 931 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 LGI2Q8N0V4 545 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 GALNT15Q8N3T1 639 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ENGASEQ8NFI3 743 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 OR2T34Q8NGX1 318 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 SPATA20Q8TB22 786 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 TSC1Q92574 1164 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 GOLGA1Q92805 767 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 CNDP2Q96KP4 475 aaKnown RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 NT5C1BQ96P26 610 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 OMDQ99983 421 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 FBRSQ9HAH7 460 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 AASDHPPTQ9NRN7 309 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ARHGAP20Q9P2F6 1191 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 SARDHQ9UL12 918 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 NCKAP1Q9Y2A7 1128 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 TLR6Q9Y2C9 796 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 CA5BQ9Y2D0 317 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 RAI2Q9Y5P3 530 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 BPTFQ12830 3046 aa6.05□□□□□ -1.44
GYPB-205ENST00000505583 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 COL27A1Q8IZC6 1860 aaPredicted RBP6.05□□□□□ -1.44
GYPB-205ENST00000505583 TDRD6O60522 2096 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 EDDM13A0A1B0GTR0 161 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TARSL2A2RTX5 802 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 E5RJQ4 531 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TLR4O00206 839 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TRIM38O00635 465 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 LATO43561 262 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SDC3O75056 442 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 RTN2O75298 545 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 C1QL1O75973 258 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 LDOC1O95751 146 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 IL1BP01584 269 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 ASLP04424 464 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 ITGAVP06756 1048 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SRPRAP08240 638 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 JUPP14923 745 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 PDGFRAP16234 1089 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 GOT1P17174 413 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TACR2P21452 398 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 C5AR1P21730 350 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 EPHA8P29322 1005 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 MAT2AP31153 395 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 GGCXP38435 758 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 CCR5P51681 352 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 NXPH1P58417 271 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms