RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 OASLQ15646 514 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 ARHGAP15Q53QZ3 475 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 MS4A13Q5J8X5 152 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 GPR158Q5T848 1215 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 DRICH1Q6PGQ1 229 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 DARS2Q6PI48 645 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 ZC3H14Q6PJT7 736 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 LRRC31Q6UY01 552 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 B4GALNT4Q76KP1 1039 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 GRASPQ7Z6J2 395 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 DENND1CQ8IV53 801 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 ALLCQ8N6M5 410 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 C12orf76Q8N812 135 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 LEMD2Q8NC56 503 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NETO2Q8NC67 525 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 ATL2Q8NHH9 583 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CASKIN2Q8WXE0 1202 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 RSAD2Q8WXG1 361 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SMG7Q92540 1137 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 TCEAL4Q96EI5 215 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 QKIQ96PU8 341 aaKnown RBP eCLIP9.62□□□□□ -0.87
TPM3-218ENST00000505010 CYP2S1Q96SQ9 504 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CATSPERBQ9H7T0 1116 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 C10orf88Q9H8K7 445 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SFXN1Q9H9B4 322 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 EPB41L5Q9HCM4 733 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 GKN1Q9NS71 199 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 DZANK1Q9NVP4 752 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 ARGLU1Q9NWB6 273 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 DNMT3BQ9UBC3 853 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 ASIC3Q9UHC3 531 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 FEZ2Q9UHY8 353 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 NEU3Q9UQ49 428 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CPQQ9Y646 472 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 R4GN57 208 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CEP250Q9BV73 2442 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NUP205Q92621 2012 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 GOLGA6L7A0A1B0GV03 622 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 F5H5T6 163 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 SCAMP3O14828 347 aaKnown RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 ACSL4O60488 711 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 IFNB1P01574 187 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 KRT14P02533 472 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 TUBBP07437 444 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 POU2F2P09086 479 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 TACR2P21452 398 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 DDX6P26196 483 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM3-218ENST00000505010 HOXC13P31276 330 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 IRAK1P51617 712 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 MLLT6P55198 1093 aaPredicted RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 SLC7A9P82251 487 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM3-218ENST00000505010 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 SLC5A9Q2M3M2 681 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 NADSYN1Q6IA69 706 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 LGI2Q8N0V4 545 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 SIX5Q8N196 739 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 NPWQ8N729 165 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 LRRN4Q8WUT4 740 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 IFT81Q8WYA0 676 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 WBP2Q969T9 261 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 ZNF707Q96C28 371 aaPredicted RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 C1orf74Q96LT6 269 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 RPRD1AQ96P16 312 aaPredicted RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 OLFM3Q96PB7 478 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 TMEM121Q9BTD3 319 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 ZYG11BQ9C0D3 744 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 DTLQ9NZJ0 730 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 MPP6Q9NZW5 540 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 LSM7Q9UK45 103 aaKnown RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 RAB21Q9UL25 225 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 DRG1Q9Y295 367 aaKnown RBP9.61□□□□□ -0.87
TPM3-218ENST00000505010 SNX24Q9Y343 169 aa9.61□□□□□ -0.87
TPM3-218ENST00000505010 CFAP69A5D8W1 941 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 KCNN4O15554 427 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 MOSPD3O75425 235 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 ERLIN1O75477 346 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 KLKB1P03952 638 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 ETS1P14921 441 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RHOQP17081 205 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 CEBPBP17676 345 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 PFKLP17858 780 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 SDHBP21912 280 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 TNFRSF8P28908 595 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms