RNA–Protein interactions for RNA: ENST00000504982.1

PAPD4-208, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-208ENST00000504982 GJD2Q9UKL4 321 aa3.17□□□□□ -1.9
PAPD4-208ENST00000504982 COPG1Q9Y678 874 aaKnown RBP3.17□□□□□ -1.9
PAPD4-208ENST00000504982 SPATA31A5Q5VU36 1347 aa3.17□□□□□ -1.9
PAPD4-208ENST00000504982 SPATA31A7Q8IWB4 1347 aa3.17□□□□□ -1.9
PAPD4-208ENST00000504982 CCDC189A1A4V9 331 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CD8B2A6NJW9 211 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 EIF3FO00303 357 aaPredicted RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 RRHO14718 337 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 NCAM2O15394 837 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 HNRNPRO43390 633 aaKnown RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 KRT38O76015 456 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CNTN5O94779 1100 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 SLC3A2P08195 630 aaKnown RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CKMT1AP12532 417 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PRF1P14222 555 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 IDUAP35475 653 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 VPS41P49754 854 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 HYAL1Q12794 435 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PDCLQ13371 301 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 FAM110CQ1W6H9 321 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 HSP90AB4PQ58FF6 505 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CC2D1BQ5T0F9 858 aaKnown RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 ANKRD45Q5TZF3 282 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 ZNF813Q6ZN06 617 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 Q6ZTC4 211 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 USP43Q70EL4 1123 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 LRRTM4Q86VH4 590 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CPOQ8IVL8 374 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 ADGRF3Q8IZF5 1079 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 TMEM57Q8N5G2 664 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PTGR2Q8N8N7 351 aaPredicted RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 EXD3Q8N9H8 876 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 SRFBP1Q8NEF9 429 aaKnown RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 HERVK_113Q902F9 699 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CELF1Q92879 486 aaKnown RBP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 CUL5Q93034 780 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 GPR78Q96P69 363 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 TWNKQ96RR1 684 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PIGSQ96S52 555 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 HTATIP2Q9BUP3 242 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 NUAK2Q9H093 628 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 RRN3Q9NYV6 651 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PGAP2Q9UHJ9 254 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 MAFFQ9ULX9 164 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 DERAQ9Y315 318 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PCDHA10Q9Y5I2 948 aa3.16□□□□□ -1.9
PAPD4-208ENST00000504982 PRSS44E7EML9 344 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 GRM8O00222 908 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ADAM10O14672 748 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 SGPL1O95470 568 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CNPP09543 421 aaKnown RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CSF1P09603 554 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 RFPL3SP0C7P2 107 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CHN1P15882 459 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 RXRAP19793 462 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 SOX2P48431 317 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PCP4P48539 62 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 RBM5P52756 815 aaKnown RBP eCLIP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 B4GALNT1Q00973 533 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ZNF268Q14587 947 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PFKFB3Q16875 520 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 GLE1Q53GS7 698 aaKnown RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ZNF484Q5JVG2 852 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ZNF474Q6S9Z5 364 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 KIAA1324Q6UXG2 1013 aaKnown RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 RTL10Q7L3V2 364 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ADPRHL1Q8NDY3 354 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CEP70Q8NHQ1 597 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 USP13Q92995 863 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ATP2A3Q93084 1043 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ARRDC3Q96B67 414 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 FCRL5Q96RD9 977 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CTAGE1Q96RT6 745 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 EFHD1Q9BUP0 239 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 HERC2P3Q9BVR0 1158 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 SFXN1Q9H9B4 322 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 CHODLQ9H9P2 273 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PRDM16Q9HAZ2 1276 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PLEKHA2Q9HB19 425 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PDE11AQ9HCR9 933 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 MLXIPLQ9NP71 852 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 SLC22A11Q9NSA0 550 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PDP2Q9P2J9 529 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 PI4KBQ9UBF8 816 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 BAG5Q9UL15 447 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 GTF2A1LQ9UNN4 478 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 DNAJC16Q9Y2G8 782 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 HEMK1Q9Y5R4 338 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 LRRFIP2Q9Y608 721 aaKnown RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 MROH2BQ7Z745 1585 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 FNDC1Q4ZHG4 1894 aaPredicted RBP3.15□□□□□ -1.91
PAPD4-208ENST00000504982 ATAD2BQ9ULI0 1458 aa3.15□□□□□ -1.91
PAPD4-208ENST00000504982 NPIPB13A6NJU9 1138 aa3.14□□□□□ -1.91
PAPD4-208ENST00000504982 SAC3D1A6NKF1 404 aa3.14□□□□□ -1.91
PAPD4-208ENST00000504982 NPIPB5A8MRT5 1133 aa3.14□□□□□ -1.91
PAPD4-208ENST00000504982 NPIPB4C9JG80 1138 aa3.14□□□□□ -1.91
PAPD4-208ENST00000504982 STX16-NPEPL1H3BU86 382 aa3.14□□□□□ -1.91
PAPD4-208ENST00000504982 STX16O14662 325 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms