RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 NEDD8-MDP1E9PL57 170 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 F5H5T6 163 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ENC1O14682 589 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ZSCAN12O43309 604 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CLDN11O75508 207 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 NFATC1O95644 943 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PDGFBP01127 241 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ATP1A1P05023 1023 aaKnown RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PTMAP06454 111 aaKnown RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 KRT7P08729 469 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 HNRNPLP14866 589 aaKnown RBP eCLIP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 RHOQP17081 205 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CD72P21854 359 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 AMPD1P23109 780 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 GALK1P51570 392 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF135P52742 658 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CDH4P55283 916 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CDH6P55285 790 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ARF5P84085 180 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 GAD2Q05329 585 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 IHHQ14623 411 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PDK2Q15119 407 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PPP2R5EQ16537 467 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ARL13BQ3SXY8 428 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 SLC44A4Q53GD3 710 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ANKRD20A8PQ5CZ79 823 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 EFHC2Q5JST6 749 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 TTC39BQ5VTQ0 682 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PAPD7Q5XG87 772 aaKnown RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PKN3Q6P5Z2 889 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 SPOCD1Q6ZMY3 1216 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CHSY1Q86X52 802 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 UBALD2Q8IYN6 164 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 APCDD1Q8J025 514 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 SLC35F6Q8N357 371 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 RASGEF1CQ8N431 466 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 TERB1Q8NA31 727 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 HJURPQ8NCD3 748 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 TTC8Q8TAM2 541 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 UBE2Q2Q8WVN8 375 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 HSPH1Q92598 858 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 BHMTQ93088 406 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 TTC17Q96AE7 1141 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CLDN23Q96B33 292 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 UHRF1Q96T88 793 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 FEM1AQ9BSK4 669 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 COL25A1Q9BXS0 654 aaPredicted RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 SLC2A11Q9BYW1 496 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ZYG11BQ9C0D3 744 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 CARD9Q9H257 536 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 ZWILCHQ9H900 591 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 C2orf42Q9NWW7 574 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 THG1LQ9NWX6 298 aaKnown RBP5.08□□□□□ -1.6
LMNB1-208ENST00000504788 DTLQ9NZJ0 730 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 EFR3BQ9Y2G0 817 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 PIAS3Q9Y6X2 628 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 SPEGQ15772 3267 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CXorf51AA0A1B0GTR3 108 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ILVBLA1L0T0 632 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MIF4GDA9UHW6 222 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 RNF103O00237 685 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EEF2KO00418 725 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MFSD11O43934 449 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MAFKO60675 156 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TBL1XO60907 577 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SRGAP2O75044 1071 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ADAM23O75077 832 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ADH1CP00326 375 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MT-CO1P00395 513 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 KRT10P13645 584 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PECAM1P16284 738 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 GLDCP23378 1020 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TARSP26639 723 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EPHB2P29323 1055 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ACVRL1P37023 503 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 IFNAR2P48551 515 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MAPKAPK2P49137 400 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PFKPQ01813 784 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 GBE1Q04446 702 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PRKCQQ04759 706 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SIGLEC14Q08ET2 396 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MLF2Q15773 248 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PLEKHG6Q3KR16 790 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 C2orf27AQ580R0 203 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PPP6R3Q5H9R7 873 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SND1Q7KZF4 910 aaKnown RBP eCLIP5.07□□□□□ -1.61e-7■■■□□ 15.1
LMNB1-208ENST00000504788 PEX26Q7Z412 305 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TFAP2DQ7Z6R9 452 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SETD3Q86TU7 594 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CCDC105Q8IYK2 499 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SYCE1Q8N0S2 351 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 NAT16Q8N8M0 369 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 NETO2Q8NC67 525 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 COG1Q8WTW3 980 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ARHGEF2Q92974 986 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TBC1D31Q96DN5 1066 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 RPRD1AQ96P16 312 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SLC39A8Q9C0K1 460 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms