RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ANKRD52Q8NB46 1076 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 IFI44Q8TCB0 444 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 PTPRN2Q92932 1015 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 ATXN7L3BQ96GX2 97 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 STARD5Q9NSY2 213 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 ANKMY1Q9P2S6 941 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 SLCO3A1Q9UIG8 710 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 KIF26BQ2KJY2 2108 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 CDRT15L2A8MXV6 281 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 SUV39H1O43463 412 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 RTN2O75298 545 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 NFKB2Q00653 900 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 LINC00303Q3SY05 128 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 FOXR1Q6PIV2 292 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 TTC39CQ8N584 583 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 IQUBQ8NA54 791 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 FAM131CQ96AQ9 280 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 RPL10LQ96L21 214 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 WDR70Q9NW82 654 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 SEPT3Q9UH03 358 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 CA5BQ9Y2D0 317 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 ENTPD2Q9Y5L3 495 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 COL12A1Q99715 3063 aa16.36■□□□□ 0.21
PDLIM7-210ENST00000503827 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 E7ENQ6 273 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 IGLV3-27P01718 113 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 AFPP02771 609 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 SFTPCP11686 197 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 MLLT3P42568 568 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 FSCBQ5H9T9 825 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 FAM46CQ5VWP2 391 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 CEP135Q66GS9 1140 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 MMS22LQ6ZRQ5 1243 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 USP53Q70EK8 1073 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 DSG4Q86SJ6 1040 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 TMEM174Q8WUU8 243 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 AZIN2Q96A70 460 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 PRR11Q96HE9 360 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 PRICKLE1Q96MT3 831 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 SPAG5Q96R06 1193 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 USP28Q96RU2 1077 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 AHCTF1Q8WYP5 2266 aa16.35■□□□□ 0.21
PDLIM7-210ENST00000503827 LY6G6EA0A0G2JKS1 128 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 SCAMP1O15126 338 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 GJB6O95452 261 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 NR3C1P04150 777 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 PDCP20941 246 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 TGM2P21980 687 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 VAMP7P51809 220 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 INHBCP55103 352 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 RPS24P62847 133 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 C1orf220Q5T0J3 134 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 MSANTD2Q6P1R3 559 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 CLEC14AQ86T13 490 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 SIX6OS1Q8N1H7 587 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC4A11Q8NBS3 891 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 MYOCQ99972 504 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 CALN1Q9BXU9 219 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 BLZF1Q9H2G9 400 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 MAGEF1Q9HAY2 307 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 ATXN7L1Q9ULK2 861 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 U3KQA8 63 aa16.34■□□□□ 0.21
PDLIM7-210ENST00000503827 K7ESM1 405 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TULP2O00295 520 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 SLC31A1O15431 190 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TNFSF15O95150 251 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 LUC7L3O95232 432 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 CD2BP2O95400 341 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 ITGB2P05107 769 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 GP1BBP13224 206 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 CASP1P29466 404 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 GCLMP48507 274 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 METAP1P53582 386 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 RAD23BP54727 409 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TBX4P57082 545 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 RBM44Q6ZP01 1051 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TMEM145Q8NBT3 493 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 WDR36Q8NI36 951 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 OR8D1Q8WZ84 308 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 TATDN2Q93075 761 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 IFT43Q96FT9 208 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 PREBQ9HCU5 417 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 CISHQ9NSE2 258 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 NCKIPSDQ9NZQ3 722 aa16.33■□□□□ 0.2
PDLIM7-210ENST00000503827 HESX1Q9UBX0 185 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms