RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PRR23D2P0DMB1 279 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PTPN1P18031 435 aaKnown RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 CCT8P50990 548 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 FMO1Q01740 532 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PDK4Q16654 411 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 SAMD4BQ5PRF9 694 aaKnown RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 CCDC103Q8IW40 242 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PIWIL2Q8TC59 973 aaKnown RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 COL1A2P08123 1366 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 VPS4BO75351 444 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF682O95780 498 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 DLGAP3O95886 979 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 AMHP03971 560 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 NFICP08651 508 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 NOS2P35228 1153 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 NCALDP61601 193 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 XRCC4Q13426 336 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 PGS1Q32NB8 556 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 DLG3Q92796 817 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 FAM192AQ9GZU8 254 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 RGS18Q9NS28 235 aa16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 UXTQ9UBK9 157 aaPredicted RBP16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 PNMA8BQ9ULN7 279 aaPredicted RBP16.46■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT6AP02538 564 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT6BP04259 564 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ITGAVP06756 1048 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT6CP48668 564 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CCNG1P51959 295 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CCDC142Q17RM4 750 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ANKS6Q68DC2 871 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ACTR8Q9H981 624 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TMEM114B3SHH9 223 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 FSCN2O14926 492 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CYP1A1P04798 512 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CYP2C18P33260 490 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 VAC14Q08AM6 782 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ABHD15Q6UXT9 468 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TBL1YQ9BQ87 522 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 UNKQ9C0B0 810 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT87PA6NCN2 255 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 MGAT4DA6NG13 374 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TGFB1I1O43294 461 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 RASSF9O75901 435 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 LDLRP01130 860 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TUBP50607 506 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 SCNN1BP51168 640 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 UGCGQ16739 394 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CES3Q6UWW8 571 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 TAS2R13Q9NYV9 303 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF839A8K0R7 811 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CBX4O00257 560 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 IMPDH2P12268 514 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CCDC130P13994 396 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.225e-7■□□□□ 10.6
HMGXB3-202ENST00000503427 TKTP29401 623 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 RPL14P50914 215 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 BLVRAP53004 296 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ARSHQ5FYA8 562 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 PLEKHA7Q6IQ23 1121 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 AGAP11Q8TF27 550 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 DPY30Q9C005 99 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 SATB2Q9UPW6 733 aa16.45■□□□□ 0.22
HMGXB3-202ENST00000503427 WNT7AO00755 349 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 RGS5O15539 181 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 LZTS3O60299 673 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SMNDC1O75940 238 aaKnown RBP eCLIP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 CHI3L1P36222 383 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SP3Q02447 781 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 PREPLQ4J6C6 727 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 PPTC7Q8NI37 304 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 PARVBQ9HBI1 364 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ABCC13Q9NSE7 274 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 UTP6Q9NYH9 597 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 COPG2Q9UBF2 871 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MYRFQ9Y2G1 1151 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 A0A0B4J269 797 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 CLOCKO15516 846 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SLC2A4P14672 509 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ETS1P14921 441 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 NOGQ13253 232 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 TMEM139Q8IV31 216 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MIER2Q8N344 545 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 WNT8BQ93098 351 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 C18orf25Q96B23 403 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MFSD14AQ96MC6 490 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ACOX2Q99424 681 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ULBP1Q9BZM6 244 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 CAB39Q9Y376 341 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 A0A087X1B8 175 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 A0A0A0MRY4 1105 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms