RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GSTA2P09210 222 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 GLULP15104 373 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 KRT4P19013 534 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 TAC1P20366 129 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
USP46-204ENST00000503060 MAP2K2P36507 400 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP46-204ENST00000503060 SLC24A5Q71RS6 500 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 PDZD4Q76G19 769 aaPredicted RBP11.88□□□□□ -0.51
USP46-204ENST00000503060 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
USP46-204ENST00000503060 COLGALT1Q8NBJ5 622 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CCNYQ8ND76 341 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CFHR5Q9BXR6 569 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 KCTD5Q9NXV2 234 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 FRMPD3Q5JV73 1810 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 IQANK1A0A1B0GTG1 560 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 DDHD2O94830 711 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 INHBAP08476 426 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 GBP2P32456 591 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 LIG3P49916 1009 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 FAM189BP81408 668 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 SLC1A5Q15758 541 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 DEFB115Q30KQ5 88 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 TP53INP2Q8IXH6 220 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 PXYLP1Q8TE99 480 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 ZNF75CPQ92670 426 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 RELTQ969Z4 430 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 EBNA1BP2Q99848 306 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 TACO1Q9BSH4 297 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 WDCPQ9H6R7 721 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 SEPT10Q9P0V9 454 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 TRPA1O75762 1119 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 PRKCHP24723 683 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 DNAJA1P31689 397 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 GRIA1P42261 906 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 ZNF135P52742 658 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 CDK16Q00536 496 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 DSC1Q08554 894 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 NOMO2Q5JPE7 1267 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 UNC5AQ6ZN44 842 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 SPATA2LQ8IUW3 424 aaPredicted RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 MPP5Q8N3R9 675 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 DQX1Q8TE96 717 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 ALKBH8Q96BT7 664 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
USP46-204ENST00000503060 EIF2B3Q9NR50 452 aaKnown RBP11.87□□□□□ -0.51
USP46-204ENST00000503060 PCNTO95613 3336 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 A6NCN8 305 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CCT8L1PA6NM43 557 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 F5H423 210 aaPredicted RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 ZWINTO95229 277 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 APOEP02649 317 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 MT-ND3P03897 115 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 MLNP12872 115 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CSE1LP55060 971 aaKnown RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 WDR45BQ5MNZ6 344 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 LHX8Q68G74 356 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 C4orf50Q6ZRC1 276 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 BEND5Q7L4P6 421 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 SLC26A11Q86WA9 606 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 SCAMP5Q8TAC9 235 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 URGCPQ8TCY9 931 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CCT6BQ92526 530 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 SH3GL1Q99961 368 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 TRIM62Q9BVG3 475 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CEP41Q9BYV8 373 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 USP15Q9Y4E8 981 aaPredicted RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 SNX5Q9Y5X3 404 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 MAD1L1Q9Y6D9 718 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 NLRC5Q86WI3 1866 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 PTPRDP23468 1912 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 INHAP05111 366 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 PARP6Q2NL67 630 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 LRRC6Q86X45 466 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 COLGALT2Q8IYK4 626 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 BANPQ8N9N5 519 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 E2F7Q96AV8 911 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms