RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GBA3Q9H227 469 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 RSPH14Q9UHP6 348 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 DNMT3LQ9UJW3 386 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 YIPF1Q9Y548 306 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 PCDHB12Q9Y5F1 795 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 ERI2A8K979 691 aaKnown RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TRDMT1O14717 391 aaKnown RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 ZBTB24O43167 697 aaPredicted RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 HMGA1P17096 107 aaKnown RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 ZBTB17Q13105 803 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TIGD7Q6NT04 549 aaPredicted RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TRMT2BQ96GJ1 504 aaKnown RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TEKT5Q96M29 485 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 MRPL17Q9NRX2 175 aaKnown RBP22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TMEM248Q9NWD8 314 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 VANGL2Q9ULK5 521 aa22.54■■□□□ 1.2
PTPN13-205ENST00000502971 TCRBV9S1A1TA0A576 114 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 ZNF840PA6NDX5 716 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 NDST2P52849 883 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 VEPH1Q14D04 833 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 ADGRD1Q6QNK2 874 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 UMODL1-AS1Q8N2C9 162 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 ZSCAN18Q8TBC5 510 aaPredicted RBP22.53■■□□□ 1.2
PTPN13-205ENST00000502971 CFAP36Q96G28 342 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 MPP6Q9NZW5 540 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 SSX2IPQ9Y2D8 614 aa22.53■■□□□ 1.2
PTPN13-205ENST00000502971 KIAA1671Q9BY89 1806 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 PTPRSQ13332 1948 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 DRGXA6NNA5 263 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 MAFKO60675 156 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 SUN1O94901 812 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 HMBSP08397 361 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 ELF1P32519 619 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 GRIA1P42261 906 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 PPP3CCP48454 512 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 HECTD3Q5T447 861 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 CCNJLQ8IV13 435 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 AGAP3Q96P47 875 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 PRMT1Q99873 361 aaKnown RBP22.52■■□□□ 1.2
PTPN13-205ENST00000502971 NDFIP2Q9NV92 336 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 TRPM5Q9NZQ8 1165 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 SENP1Q9P0U3 644 aa22.52■■□□□ 1.2
PTPN13-205ENST00000502971 SDR42E2A6NKP2 422 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 ZBBXA8MT70 800 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 F5H423 210 aaPredicted RBP22.51■■□□□ 1.19
PTPN13-205ENST00000502971 MATN3O15232 486 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 AP2A1O95782 977 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 JCHAINP01591 159 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 CHN1P15882 459 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 SYN1P17600 705 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 CD68P34810 354 aaPredicted RBP22.51■■□□□ 1.19
PTPN13-205ENST00000502971 MSH2P43246 934 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 HTRA4P83105 476 aaPredicted RBP22.51■■□□□ 1.19
PTPN13-205ENST00000502971 TAF12Q16514 161 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 TMEM240Q5SV17 173 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 TRABD2AQ86V40 505 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 TCEAL8Q8IYN2 117 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 MDM1Q8TC05 714 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 PAFAH2Q99487 392 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 EPN3Q9H201 632 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 ARHGAP42A6NI28 874 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 RASA4BC9J798 803 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 PRRG1O14668 218 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 PSMD3O43242 534 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 RASA4O43374 803 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 GJB5O95377 273 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 CCNB1P14635 433 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 PRPSAP1Q14558 356 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 RAP1GAP2Q684P5 730 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 FBXL22Q6P050 247 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 ARHGAP36Q6ZRI8 547 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 FIBCD1Q8N539 461 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 STAMBPL1Q96FJ0 436 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 IL12RB2Q99665 862 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 GORASP1Q9BQQ3 440 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 NACA2Q9H009 215 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 MTIF3Q9H2K0 278 aaKnown RBP22.51■■□□□ 1.19
PTPN13-205ENST00000502971 RXFP1Q9HBX9 757 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 TTLL3Q9Y4R7 772 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 PCDHA11Q9Y5I1 949 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 MAD1L1Q9Y6D9 718 aa22.51■■□□□ 1.19
PTPN13-205ENST00000502971 CACNG3O60359 315 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 LILRB3O75022 631 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 BRAFP15056 766 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 NFKB1P19838 968 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 PRKCHP24723 683 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 EFTUD2Q15029 972 aaKnown RBP eCLIP22.5■■□□□ 1.19
PTPN13-205ENST00000502971 KCTD11Q693B1 232 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 UNC5AQ6ZN44 842 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 SRRM1Q8IYB3 904 aaKnown RBP22.5■■□□□ 1.19
PTPN13-205ENST00000502971 GSDMBQ8TAX9 411 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 HERVK_113Q902F9 699 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 FATE1Q969F0 183 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 PPP1R2P1Q96PQ5 205 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 NAT9Q9BTE0 207 aa22.5■■□□□ 1.19
PTPN13-205ENST00000502971 INTS9Q9NV88 658 aaKnown RBP22.5■■□□□ 1.19
PTPN13-205ENST00000502971 UXTQ9UBK9 157 aaPredicted RBP22.5■■□□□ 1.19
PTPN13-205ENST00000502971 FGF18O76093 207 aa22.49■■□□□ 1.19
PTPN13-205ENST00000502971 KRT15P19012 456 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 322.5 ms