RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 VPS28Q9UK41 221 aa19.79■□□□□ 0.76
CTDSP1-213ENST00000496785 FZD10Q9ULW2 581 aa19.79■□□□□ 0.76
CTDSP1-213ENST00000496785 SNX10Q9Y5X0 201 aa19.79■□□□□ 0.76
CTDSP1-213ENST00000496785 RAD54BQ9Y620 910 aa19.79■□□□□ 0.76
CTDSP1-213ENST00000496785 WASH3PC4AMC7 463 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 HRO43593 1189 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 PRPSAP2O60256 369 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 GFRA3O60609 400 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 CNTN5O94779 1100 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 RHOQP17081 205 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 GABRG2P18507 467 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 MAPKAPK2P49137 400 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 MRE11P49959 708 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 IRAK1P51617 712 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 GALCP54803 685 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 PTPRNQ16849 979 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 ASTE1Q2TB18 679 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 ALFQ53S48 1182 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 MANEALQ5VSG8 457 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 LAIR1Q6GTX8 287 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 RWDD4Q6NW29 188 aaKnown RBP19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 PSTKQ8IV42 348 aaKnown RBP19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 NUP85Q9BW27 656 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 MPP6Q9NZW5 540 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 UVRAGQ9P2Y5 699 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 IP6K2Q9UHH9 426 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 GMEB2Q9UKD1 530 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 NENFQ9UMX5 172 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 ERVW-1Q9UQF0 538 aa19.78■□□□□ 0.76
CTDSP1-213ENST00000496785 ILVBLA1L0T0 632 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 LRIG2O94898 1065 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 NDUFV2P19404 249 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 PRKCHP24723 683 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 MZF1P28698 734 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 PCK1P35558 622 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 VASPP50552 380 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 ZNF135P52742 658 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 CAMK2GQ13555 558 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 ELF2Q15723 593 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 KIAA1211LQ6NV74 962 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 TFAP2DQ7Z6R9 452 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 APCDD1Q8J025 514 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 DCAF4L2Q8NA75 395 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 SUMF1Q8NBK3 374 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 FEM1AQ9BSK4 669 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 CATSPERBQ9H7T0 1116 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 CD248Q9HCU0 757 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 ANAPC7Q9UJX3 599 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 AP4E1Q9UPM8 1137 aa19.77■□□□□ 0.76
CTDSP1-213ENST00000496785 MYO1FO00160 1098 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 RHOBTB1O94844 696 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 TMEM253P0C7T8 217 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 HOXC13P31276 330 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 P2RY2P41231 377 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 ZNF252P-AS1Q0IIN9 211 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 ERMARDQ5T6L9 678 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 METTL3Q86U44 580 aaKnown RBP19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 NIPA2Q8N8Q9 360 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 TC2NQ8N9U0 490 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 OR2T3Q8NH03 318 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 RUBCNQ92622 972 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 PRCCQ92733 491 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 CHP1Q99653 195 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 PRDM16Q9HAZ2 1276 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 TMEM248Q9NWD8 314 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 CTTNBP2NLQ9P2B4 639 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 NCDNQ9UBB6 729 aa19.76■□□□□ 0.75
CTDSP1-213ENST00000496785 EDDM13A0A1B0GTR0 161 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 TARSL2A2RTX5 802 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 GOLGA6L6A8MZA4 724 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 FGF10O15520 208 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 RNASEH1O60930 286 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 LRCH4O75427 683 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 ACADMP11310 421 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 HLA-EP13747 358 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 EPHB2P29323 1055 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 SRSF5Q13243 272 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 HNRNPA1L2Q32P51 320 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 KIAA1324Q6UXG2 1013 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 SLC36A4Q6YBV0 504 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 ASCL5Q7RTU5 278 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 ALYREFQ86V81 257 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 ZNF564Q8TBZ8 553 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 ALG14Q96F25 216 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 SIPA1Q96FS4 1042 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 LOXL4Q96JB6 756 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 MRGPRX3Q96LB0 322 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 MRGPRX1Q96LB2 322 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 PANX2Q96RD6 677 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 TRIM7Q9C029 511 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 LUC7LQ9NQ29 371 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 USP18Q9UMW8 372 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 OR51B4Q9Y5P0 310 aa19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 MUC22E2RYF6 1773 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-213ENST00000496785 CXorf51AA0A1B0GTR3 108 aa19.74■□□□□ 0.75
CTDSP1-213ENST00000496785 CREB3O43889 395 aa19.74■□□□□ 0.75
CTDSP1-213ENST00000496785 MIPP30301 263 aa19.74■□□□□ 0.75
CTDSP1-213ENST00000496785 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
CTDSP1-213ENST00000496785 TPI1P60174 286 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms