RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CD207Q9UJ71 328 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 COL11A1P12107 1806 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 LEFTY2O00292 366 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 KRT38O76015 456 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 ACOX1Q15067 660 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 TTC31Q49AM3 519 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 CPLX4Q7Z7G2 160 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 ARID3BQ8IVW6 561 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 RGL4Q8IZJ4 473 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 OVCA2Q8WZ82 227 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 E2F7Q96AV8 911 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 ZNF669Q96BR6 464 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 CLSTN3Q9BQT9 956 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
GAPVD1-219ENST00000495955 ZSCAN5CA6NGD5 496 aaPredicted RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 OPHN1O60890 802 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ALDH1A2O94788 518 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 CRTAMO95727 393 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 RHOQP17081 205 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 POLR2LP62875 67 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 NTHL1P78549 312 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 EMBQ6PCB8 327 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 GPRIN1Q7Z2K8 1008 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 FAM124AQ86V42 546 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SPATA17Q96L03 361 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 VPS11Q9H270 941 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 MARCH5Q9NX47 278 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LZTS1Q9Y250 596 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 MCM3APO60318 1980 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 MYH11P35749 1972 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 H0YHG0 523 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LRIG2O94898 1065 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 EPHX1P07099 455 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ADH5P11766 374 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SLC45A4Q5BKX6 768 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 OR6K2Q8NGY2 324 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LGMNQ99538 433 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 PBX4Q9BYU1 374 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ADAM7Q9H2U9 754 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LRRC40Q9H9A6 602 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ARHGEF38Q9NXL2 777 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 FAM153AQ9UHL3 310 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SMCHD1A6NHR9 2005 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 GOLGA6L7A0A1B0GV03 622 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 COCHO43405 550 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SH3BP5O60239 455 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 CD86P42081 329 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 IRX4P78413 519 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 KCTD16Q68DU8 428 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 OLFML1Q6UWY5 402 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 LINGO4Q6UY18 593 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 METTL3Q86U44 580 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SPPL3Q8TCT6 385 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 C9orf72Q96LT7 481 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 EBF3Q9H4W6 596 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ABCB8Q9NUT2 735 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 hCG_1818297A0A087WSY0 165 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 SMAPO00193 183 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 HOXB8P17481 243 aaPredicted RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 ZNF132P52740 706 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 MAXP61244 160 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 FYB2Q5VWT5 728 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 TCEAL8Q8IYN2 117 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 DEFB123Q8N688 67 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 PSMG2Q969U7 264 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 STAMBPL1Q96FJ0 436 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 VAT1Q99536 393 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 PIH1D1Q9NWS0 290 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 FNIP2Q9P278 1114 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 FZD10Q9ULW2 581 aa9.67□□□□□ -0.86
GAPVD1-219ENST00000495955 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 CLASP2O75122 1294 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 CYP2A6P11509 494 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 TPH1P17752 444 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ADGRF1Q5T601 910 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 TMCO4Q5TGY1 634 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 LRRC49Q8IUZ0 686 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 TMPRSS4Q9NRS4 437 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 HACD3Q9P035 362 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 GABRDO14764 452 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 TADA3O75528 432 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 DNTTP04053 509 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ERVK-21P61565 698 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 RPS24P62847 133 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 PARP15Q460N3 678 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ANKS1BQ7Z6G8 1248 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms